Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 AC079331.1-201ENST00000623200 1200 ntBASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 CD36-207ENST00000432207 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 FAM117A-209ENST00000513602 1522 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 SPRYD3-204ENST00000547837 1655 ntTSL 5 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 SNORA52-201ENST00000362915 134 ntBASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 AL157414.1-201ENST00000366097 770 ntTSL 3 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 AC012066.1-201ENST00000439252 694 ntBASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 SRP19-206ENST00000515463 660 ntTSL 3 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 FOS-205ENST00000555242 629 ntTSL 2 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 LINC01988-202ENST00000636975 921 ntTSL 5 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SPHKAPQ2M3C7 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 AL356583.1-201ENST00000398739 1371 ntBASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 OR2T34-201ENST00000328782 957 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 OR2T3-201ENST00000359594 957 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 MBL3P-201ENST00000402234 644 ntBASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 ART2P-201ENST00000415521 822 ntBASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 AC253536.2-201ENST00000423307 254 ntBASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 AL663070.1-201ENST00000438210 725 ntBASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 VDAC1P13-201ENST00000447826 859 ntBASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 CNTFR-AS1-203ENST00000453642 723 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 RN7SL5P-201ENST00000581458 321 ntBASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 HINFP-204ENST00000527410 1466 ntTSL 2 BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 AL627309.3-201ENST00000495576 1319 ntTSL 5 BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 FAM90A27P-201ENST00000593323 1370 ntBASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 FAM90A28P-202ENST00000597191 1374 ntBASIC18.53■□□□□ 0.56
SPHKAPQ2M3C7 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 OLFML3-201ENST00000320334 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 SPACA7-201ENST00000283550 795 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 RPS21-202ENST00000370562 1002 ntTSL 2 BASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 OR7E26P-201ENST00000502808 1006 ntBASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 RN7SL460P-201ENST00000582806 258 ntBASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 LINC00868-203ENST00000592919 853 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 SARS2-211ENST00000598831 665 ntTSL 5 BASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 MIR6770-3-201ENST00000616362 60 ntBASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 MIR6770-2-201ENST00000618304 60 ntBASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 MIR6770-1-201ENST00000622248 60 ntBASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 OGDH-203ENST00000439616 2962 ntTSL 2 BASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 ALG8-201ENST00000299626 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 AC020658.7-201ENST00000624274 2442 ntBASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 ZNF215-207ENST00000610573 1503 ntTSL 5 BASIC18.52■□□□□ 0.56
SPHKAPQ2M3C7 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms