Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 CFL1P6-201ENST00000400899 494 ntBASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 AC008723.1-201ENST00000506922 207 ntBASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 AP005264.5-201ENST00000590066 467 ntBASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 AL118558.3-201ENST00000607414 1079 ntBASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 Z82244.1-201ENST00000631502 840 ntBASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
POLR2J2Q9GZM3 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 AC008764.8-201ENST00000623966 2717 ntBASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 MIR1908-201ENST00000410394 80 ntBASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 GRPEL2P1-201ENST00000453145 339 ntBASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 AP001258.2-201ENST00000529891 490 ntBASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 AC091544.8-201ENST00000619490 361 ntBASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
POLR2J2Q9GZM3 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms