Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 MIR941-1-201ENST00000636396 72 ntBASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 ORC6-204ENST00000566860 1699 ntTSL 2 BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 SEPT4-203ENST00000393086 1556 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC42BPAQ5VT25 GRK6P1-201ENST00000400595 1711 ntBASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 IL32-204ENST00000396887 789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 TGIF2P1-201ENST00000435390 685 ntBASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 PFN1P3-201ENST00000443612 402 ntBASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 PFN1P4-201ENST00000450970 402 ntBASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 TSACC-206ENST00000466306 477 ntTSL 3 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 GNGT2-204ENST00000511277 918 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 AC090236.1-201ENST00000590318 768 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 CGREF1-209ENST00000640154 336 ntTSL 5 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 SIGLEC20P-201ENST00000595243 1311 ntBASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 SLC26A5-211ENST00000432958 2588 ntTSL 5 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 CNTF-201ENST00000361987 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 ZNRD1ASP-215ENST00000425604 1986 ntTSL 3 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 PES1P1-201ENST00000508165 1736 ntBASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 GMNN-202ENST00000356509 1133 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 FKBP1A-201ENST00000381715 705 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 AC003101.1-201ENST00000412403 459 ntTSL 3 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 IGHV3-74-201ENST00000424969 587 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 IGHVII-65-1-201ENST00000519992 302 ntBASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 AP000892.2-201ENST00000613535 324 ntBASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 AC127526.5-201ENST00000637148 1110 ntBASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 AL009178.2-201ENST00000597278 2719 ntBASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 AMD1P4-201ENST00000299540 1345 ntBASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 AC078850.1-201ENST00000514265 1623 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 SLC9A3P3-201ENST00000457608 2229 ntBASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 SNHG14-218ENST00000553108 2208 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CDC42BPAQ5VT25 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 SERINC3-201ENST00000255175 1726 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 NFKBIA-208ENST00000557140 1400 ntTSL 5 BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 BET1-201ENST00000222547 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 CCDC32-214ENST00000561011 1577 ntTSL 2 BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 MIR646HG-204ENST00000427820 805 ntTSL 5 BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 U62317.1-201ENST00000434237 157 ntTSL 3 BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 AC009238.3-201ENST00000512705 217 ntBASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 AL031058.1-201ENST00000561592 888 ntBASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 EIF3K-213ENST00000593149 760 ntTSL 2 BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 ZNF551-202ENST00000596085 469 ntTSL 2 BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 AL627230.7-201ENST00000613971 601 ntBASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 AP006621.5-202ENST00000623692 636 ntBASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 AC109635.4-201ENST00000636653 1005 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 CD36-207ENST00000432207 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms