Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.08□□□□□ -0.48
ZIC3O60481 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
ZIC3O60481 PPT1-213ENST00000641319 2388 ntBASIC12.07□□□□□ -0.48
ZIC3O60481 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 MKRN7P-201ENST00000433469 1371 ntBASIC12.07□□□□□ -0.48
ZIC3O60481 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.07□□□□□ -0.48
ZIC3O60481 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.07□□□□□ -0.48
ZIC3O60481 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
ZIC3O60481 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
ZIC3O60481 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.07□□□□□ -0.48
ZIC3O60481 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 TPI1P3-201ENST00000335020 740 ntBASIC12.07□□□□□ -0.48
ZIC3O60481 CCL19-202ENST00000378800 414 ntTSL 2 BASIC12.07□□□□□ -0.48
ZIC3O60481 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC12.07□□□□□ -0.48
ZIC3O60481 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 PHBP10-201ENST00000416467 784 ntBASIC12.07□□□□□ -0.48
ZIC3O60481 ZDHHC8P1-202ENST00000418264 1403 ntBASIC12.07□□□□□ -0.48
ZIC3O60481 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC12.07□□□□□ -0.48
ZIC3O60481 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
ZIC3O60481 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC12.07□□□□□ -0.48
ZIC3O60481 AC026470.1-201ENST00000478038 846 ntBASIC12.07□□□□□ -0.48
ZIC3O60481 RN7SL288P-201ENST00000490496 291 ntBASIC12.07□□□□□ -0.48
ZIC3O60481 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 NSD1-211ENST00000511258 809 ntTSL 3 BASIC12.07□□□□□ -0.48
ZIC3O60481 AC106047.2-201ENST00000511723 743 ntBASIC12.07□□□□□ -0.48
ZIC3O60481 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC12.07□□□□□ -0.48
ZIC3O60481 RNA5SP420-201ENST00000516997 137 ntBASIC12.07□□□□□ -0.48
ZIC3O60481 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC12.07□□□□□ -0.48
ZIC3O60481 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC12.07□□□□□ -0.48
ZIC3O60481 AC068831.5-201ENST00000557387 328 ntBASIC12.07□□□□□ -0.48
ZIC3O60481 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC12.07□□□□□ -0.48
ZIC3O60481 AC023968.2-201ENST00000560593 1049 ntBASIC12.07□□□□□ -0.48
ZIC3O60481 AC091304.3-201ENST00000566500 716 ntBASIC12.07□□□□□ -0.48
ZIC3O60481 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC12.07□□□□□ -0.48
ZIC3O60481 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC12.07□□□□□ -0.48
ZIC3O60481 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC12.07□□□□□ -0.48
ZIC3O60481 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.07□□□□□ -0.48
ZIC3O60481 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.07□□□□□ -0.48
ZIC3O60481 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.07□□□□□ -0.48
ZIC3O60481 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZIC3O60481 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.07□□□□□ -0.48
ZIC3O60481 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.06□□□□□ -0.48
ZIC3O60481 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
ZIC3O60481 TUBB8P5-201ENST00000445286 1351 ntBASIC12.06□□□□□ -0.48
ZIC3O60481 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.06□□□□□ -0.48
ZIC3O60481 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.06□□□□□ -0.48
ZIC3O60481 AC115284.2-201ENST00000624646 2054 ntBASIC12.06□□□□□ -0.48
ZIC3O60481 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 AC011477.7-201ENST00000617163 1440 ntBASIC12.06□□□□□ -0.48
ZIC3O60481 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
ZIC3O60481 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
ZIC3O60481 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC12.06□□□□□ -0.48
ZIC3O60481 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC12.06□□□□□ -0.48
ZIC3O60481 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZIC3O60481 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
ZIC3O60481 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC12.06□□□□□ -0.48
ZIC3O60481 NRADDP-201ENST00000437305 691 ntBASIC12.06□□□□□ -0.48
ZIC3O60481 AC025594.1-201ENST00000469533 543 ntBASIC12.06□□□□□ -0.48
ZIC3O60481 CXXC1P1-202ENST00000489409 1212 ntBASIC12.06□□□□□ -0.48
ZIC3O60481 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
ZIC3O60481 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
ZIC3O60481 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
ZIC3O60481 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC12.06□□□□□ -0.48
ZIC3O60481 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC12.06□□□□□ -0.48
ZIC3O60481 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC12.06□□□□□ -0.48
ZIC3O60481 HMGB1P24-201ENST00000611897 328 ntBASIC12.06□□□□□ -0.48
ZIC3O60481 C2orf27AP1-201ENST00000618128 586 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms