Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 FAM90A17P-201ENST00000533716 1957 ntBASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 AC239868.1-201ENST00000369385 493 ntBASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 ACTG1P2-201ENST00000415776 1125 ntBASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 ACTG1P11-201ENST00000425411 1125 ntBASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 AC024681.1-201ENST00000521917 487 ntBASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 DNM1P51-201ENST00000558149 522 ntBASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 MIR4326-201ENST00000582203 59 ntBASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 PISD-203ENST00000397500 2194 ntTSL 5 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 ANKRD20A7P-201ENST00000402318 2414 ntBASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AMBRA1Q9C0C7 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 AC015909.3-201ENST00000572855 1794 ntBASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 DNM1P41-201ENST00000623634 3350 ntBASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 AL450468.2-201ENST00000565955 1889 ntBASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 ISCA2P1-201ENST00000425548 448 ntBASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 AC006335.1-201ENST00000445200 547 ntBASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 MAGEA5-201ENST00000446757 942 ntBASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 LDHBP1-201ENST00000455730 1119 ntBASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 KLF17P1-201ENST00000547105 1126 ntBASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 AC132825.4-202ENST00000578792 434 ntBASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 AP001505.2-201ENST00000616815 443 ntBASIC12.66□□□□□ -0.38
AMBRA1Q9C0C7 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms