Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 PHBP11-201ENST00000420550 809 ntBASIC16.53■□□□□ 0.24
RC3H1Q5TC82 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 AC092745.1-201ENST00000535746 603 ntTSL 5 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 AC051619.6-201ENST00000558039 595 ntTSL 4 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 AC013356.4-201ENST00000558421 482 ntTSL 2 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 AC103876.1-203ENST00000565495 290 ntTSL 5 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 PAX6-247ENST00000638965 979 ntTSL 5 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 SERPINA1-220ENST00000636712 1485 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 ALDH3B2-204ENST00000530069 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 SULT1A3-202ENST00000395138 1326 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 CTCFL-211ENST00000502686 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 IST1-221ENST00000544564 1500 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 ZNF816-201ENST00000270457 582 ntTSL 3 BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 OR2T34-201ENST00000328782 957 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 OR2T3-201ENST00000359594 957 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 VSTM1-202ENST00000366170 654 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 KRT18P39-201ENST00000415349 1299 ntBASIC16.52■□□□□ 0.24
RC3H1Q5TC82 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 AC005011.1-201ENST00000455206 210 ntBASIC16.52■□□□□ 0.24
RC3H1Q5TC82 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 LDHAL6CP-201ENST00000502352 1142 ntBASIC16.52■□□□□ 0.24
RC3H1Q5TC82 EEF1GP2-201ENST00000509352 1243 ntBASIC16.52■□□□□ 0.24
RC3H1Q5TC82 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 AC002519.2-201ENST00000563575 539 ntTSL 4 BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 AC239600.1-201ENST00000603201 462 ntBASIC16.52■□□□□ 0.24
RC3H1Q5TC82 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 PDZRN3-AS1-202ENST00000608304 774 ntTSL 5 BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RC3H1Q5TC82 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RC3H1Q5TC82 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RC3H1Q5TC82 ACAA2-205ENST00000587994 1657 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
RC3H1Q5TC82 ACR-201ENST00000216139 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RC3H1Q5TC82 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
RC3H1Q5TC82 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.52■□□□□ 0.23
RC3H1Q5TC82 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RC3H1Q5TC82 HYLS1-201ENST00000356438 1810 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
RC3H1Q5TC82 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC16.51■□□□□ 0.23
RC3H1Q5TC82 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.51■□□□□ 0.23
RC3H1Q5TC82 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.51■□□□□ 0.23
RC3H1Q5TC82 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RC3H1Q5TC82 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RC3H1Q5TC82 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RC3H1Q5TC82 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RC3H1Q5TC82 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RC3H1Q5TC82 DNASE1L3-207ENST00000486455 1321 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RC3H1Q5TC82 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RC3H1Q5TC82 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RC3H1Q5TC82 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC16.51■□□□□ 0.23
RC3H1Q5TC82 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RC3H1Q5TC82 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RC3H1Q5TC82 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RC3H1Q5TC82 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
RC3H1Q5TC82 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms