Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 AFG3L2P1-201ENST00000521792 1763 ntBASIC11.02□□□□□ -0.65
RAB40CQ96S21 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 AL031587.5-201ENST00000624344 1849 ntBASIC11.02□□□□□ -0.65
RAB40CQ96S21 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB40CQ96S21 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC11.02□□□□□ -0.65
RAB40CQ96S21 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 ENTPD3-203ENST00000445129 1658 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 DDC-212ENST00000615193 1674 ntTSL 3 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 AC015818.9-201ENST00000591705 4582 ntBASIC11.01□□□□□ -0.65
RAB40CQ96S21 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 NDUFAB1P1-201ENST00000404262 460 ntBASIC11.01□□□□□ -0.65
RAB40CQ96S21 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 SERF2-206ENST00000409291 807 ntTSL 3 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 AC104989.1-201ENST00000519711 778 ntBASIC11.01□□□□□ -0.65
RAB40CQ96S21 AC093752.3-201ENST00000567343 901 ntBASIC11.01□□□□□ -0.65
RAB40CQ96S21 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 RPS24-214ENST00000613865 538 ntTSL 5 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 POM121L4P-202ENST00000427789 1891 ntBASIC11.01□□□□□ -0.65
RAB40CQ96S21 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 STX16-202ENST00000355957 4897 ntTSL 2 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 AL132642.2-201ENST00000623423 1998 ntBASIC11.01□□□□□ -0.65
RAB40CQ96S21 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB40CQ96S21 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
RAB40CQ96S21 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
RAB40CQ96S21 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC11□□□□□ -0.65
RAB40CQ96S21 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC11□□□□□ -0.65
RAB40CQ96S21 KRT8P43-201ENST00000406052 1458 ntBASIC11□□□□□ -0.65
RAB40CQ96S21 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC11□□□□□ -0.65
RAB40CQ96S21 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 RUNX2-AS1-201ENST00000563807 1513 ntTSL 5 BASIC11□□□□□ -0.65
RAB40CQ96S21 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
RAB40CQ96S21 AL359510.2-201ENST00000624958 2249 ntBASIC11□□□□□ -0.65
RAB40CQ96S21 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 ELN-205ENST00000358929 3967 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
RAB40CQ96S21 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC11□□□□□ -0.65
RAB40CQ96S21 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
RAB40CQ96S21 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms