Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 CXorf40B-203ENST00000370406 1653 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 GALP-202ENST00000440823 889 ntTSL 5 BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 AC079112.1-201ENST00000454972 939 ntBASIC14.34□□□□□ -0.11
LMO3Q8TAP4 AC018463.1-201ENST00000456674 917 ntBASIC14.34□□□□□ -0.11
LMO3Q8TAP4 TBC1D3P6-201ENST00000505954 962 ntBASIC14.34□□□□□ -0.11
LMO3Q8TAP4 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 AC005777.1-201ENST00000588332 187 ntBASIC14.34□□□□□ -0.11
LMO3Q8TAP4 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 AC011247.3-201ENST00000603297 438 ntBASIC14.34□□□□□ -0.11
LMO3Q8TAP4 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 CYFIP2-222ENST00000620254 4124 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 LIPC-202ENST00000356113 2161 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.34□□□□□ -0.11
LMO3Q8TAP4 NFIC-211ENST00000641145 8399 ntBASIC14.33□□□□□ -0.11
LMO3Q8TAP4 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LMO3Q8TAP4 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LMO3Q8TAP4 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC14.33□□□□□ -0.11
LMO3Q8TAP4 LDLRAD1-203ENST00000420619 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LMO3Q8TAP4 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 IGHVII-33-1-201ENST00000524010 280 ntBASIC14.33□□□□□ -0.12
LMO3Q8TAP4 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 AC073869.4-201ENST00000620841 800 ntBASIC14.33□□□□□ -0.12
LMO3Q8TAP4 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 DRD3-204ENST00000467632 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 TNRC18P1-201ENST00000502875 3650 ntBASIC14.33□□□□□ -0.12
LMO3Q8TAP4 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LMO3Q8TAP4 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC14.32□□□□□ -0.12
LMO3Q8TAP4 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LMO3Q8TAP4 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LMO3Q8TAP4 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LMO3Q8TAP4 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LMO3Q8TAP4 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LMO3Q8TAP4 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LMO3Q8TAP4 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LMO3Q8TAP4 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LMO3Q8TAP4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms