Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 AC006001.1-201ENST00000325130 474 ntBASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 BCRP1-201ENST00000444246 691 ntBASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 RNA5SP421-201ENST00000516864 134 ntBASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 HNRNPA1P36-201ENST00000521313 955 ntBASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 AP006547.1-201ENST00000563435 692 ntBASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 DGKZP1-201ENST00000378718 2776 ntBASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 PER1-211ENST00000581082 4521 ntTSL 5 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 PXN-204ENST00000424649 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 AFG3L2P1-201ENST00000521792 1763 ntBASIC11.11□□□□□ -0.63
RCL1Q9Y2P8 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 ITPRIP-202ENST00000337478 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 AIF1L-201ENST00000247291 3364 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 MTRF1L-203ENST00000367233 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 AL031587.5-201ENST00000624344 1849 ntBASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 NBPF17P-201ENST00000401087 2119 ntBASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 AC016694.1-201ENST00000434179 700 ntBASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 AC007279.1-201ENST00000448547 837 ntBASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 HOMER2P2-201ENST00000451621 847 ntBASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 PFN2-215ENST00000497148 743 ntTSL 4 BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC11.1□□□□□ -0.63
RCL1Q9Y2P8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms