Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 BOLL-205ENST00000433157 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.65□□□□□ -0.38
HPS1Q92902 PPP1R26-AS1-201ENST00000455039 643 ntTSL 4 BASIC12.65□□□□□ -0.38
HPS1Q92902 AKR7A2P1-201ENST00000460134 915 ntBASIC12.65□□□□□ -0.38
HPS1Q92902 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 TPI1-206ENST00000488464 791 ntTSL 5 BASIC12.65□□□□□ -0.38
HPS1Q92902 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.65□□□□□ -0.38
HPS1Q92902 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.65□□□□□ -0.38
HPS1Q92902 AC024267.5-201ENST00000579154 599 ntBASIC12.65□□□□□ -0.38
HPS1Q92902 AC126365.2-201ENST00000580630 379 ntBASIC12.65□□□□□ -0.38
HPS1Q92902 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 AC020914.3-201ENST00000594712 304 ntBASIC12.65□□□□□ -0.38
HPS1Q92902 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.65□□□□□ -0.38
HPS1Q92902 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 SALL4P5-201ENST00000419001 1760 ntBASIC12.65□□□□□ -0.38
HPS1Q92902 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 AC083899.2-201ENST00000423285 1376 ntBASIC12.65□□□□□ -0.38
HPS1Q92902 DYNC1I1-204ENST00000437599 2895 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 AC092964.1-201ENST00000623304 1399 ntBASIC12.65□□□□□ -0.38
HPS1Q92902 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.65□□□□□ -0.38
HPS1Q92902 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
HPS1Q92902 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
HPS1Q92902 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HPS1Q92902 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
HPS1Q92902 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.65□□□□□ -0.39
HPS1Q92902 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
HPS1Q92902 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
HPS1Q92902 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 CLUHP2-201ENST00000426660 1303 ntBASIC12.64□□□□□ -0.39
HPS1Q92902 FKBP4P6-201ENST00000457486 1332 ntBASIC12.64□□□□□ -0.39
HPS1Q92902 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC12.64□□□□□ -0.39
HPS1Q92902 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC12.64□□□□□ -0.39
HPS1Q92902 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 MYADML-201ENST00000474610 2147 ntBASIC12.64□□□□□ -0.39
HPS1Q92902 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
HPS1Q92902 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.64□□□□□ -0.39
HPS1Q92902 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC12.64□□□□□ -0.39
HPS1Q92902 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 MIR663B-201ENST00000408361 115 ntBASIC12.64□□□□□ -0.39
HPS1Q92902 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC12.64□□□□□ -0.39
HPS1Q92902 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC12.64□□□□□ -0.39
HPS1Q92902 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.64□□□□□ -0.39
HPS1Q92902 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.64□□□□□ -0.39
HPS1Q92902 ZNF767P-206ENST00000513792 565 ntBASIC12.64□□□□□ -0.39
HPS1Q92902 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 AC129507.2-201ENST00000572499 748 ntTSL 3 BASIC12.64□□□□□ -0.39
HPS1Q92902 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.64□□□□□ -0.39
HPS1Q92902 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.64□□□□□ -0.39
HPS1Q92902 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.64□□□□□ -0.39
HPS1Q92902 AL157392.4-201ENST00000609756 345 ntBASIC12.64□□□□□ -0.39
HPS1Q92902 ZACNP1-201ENST00000612259 710 ntBASIC12.64□□□□□ -0.39
HPS1Q92902 AC080188.3-201ENST00000624842 748 ntBASIC12.64□□□□□ -0.39
HPS1Q92902 AL138960.2-201ENST00000625145 535 ntBASIC12.64□□□□□ -0.39
HPS1Q92902 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.64□□□□□ -0.39
HPS1Q92902 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.64□□□□□ -0.39
HPS1Q92902 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.64□□□□□ -0.39
HPS1Q92902 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
HPS1Q92902 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC12.64□□□□□ -0.39
HPS1Q92902 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
HPS1Q92902 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
HPS1Q92902 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
HPS1Q92902 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
HPS1Q92902 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HPS1Q92902 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms