Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SUMO3P55854 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SUMO3P55854 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SUMO3P55854 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
SUMO3P55854 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
SUMO3P55854 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SUMO3P55854 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC12.22□□□□□ -0.45
SUMO3P55854 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
SUMO3P55854 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SUMO3P55854 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SUMO3P55854 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
SUMO3P55854 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
SUMO3P55854 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.22□□□□□ -0.45
SUMO3P55854 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SUMO3P55854 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SUMO3P55854 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SUMO3P55854 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SUMO3P55854 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SUMO3P55854 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.21□□□□□ -0.45
SUMO3P55854 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SUMO3P55854 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SUMO3P55854 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC12.21□□□□□ -0.45
SUMO3P55854 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SUMO3P55854 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 TUBB8P5-201ENST00000445286 1351 ntBASIC12.21□□□□□ -0.45
SUMO3P55854 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 AL031587.5-201ENST00000624344 1849 ntBASIC12.21□□□□□ -0.45
SUMO3P55854 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC12.21□□□□□ -0.45
SUMO3P55854 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC12.21□□□□□ -0.45
SUMO3P55854 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SUMO3P55854 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 AL357563.1-201ENST00000404728 395 ntBASIC12.21□□□□□ -0.45
SUMO3P55854 SNORA50D-201ENST00000408059 134 ntBASIC12.21□□□□□ -0.45
SUMO3P55854 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC12.21□□□□□ -0.45
SUMO3P55854 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC12.21□□□□□ -0.45
SUMO3P55854 KRT18P4-201ENST00000422599 1288 ntBASIC12.21□□□□□ -0.45
SUMO3P55854 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC12.21□□□□□ -0.45
SUMO3P55854 AC015818.1-201ENST00000451011 244 ntBASIC12.21□□□□□ -0.45
SUMO3P55854 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC12.21□□□□□ -0.45
SUMO3P55854 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC12.21□□□□□ -0.45
SUMO3P55854 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC12.21□□□□□ -0.45
SUMO3P55854 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC12.21□□□□□ -0.45
SUMO3P55854 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC12.21□□□□□ -0.45
SUMO3P55854 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SUMO3P55854 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 MIR4706-201ENST00000582134 82 ntBASIC12.21□□□□□ -0.45
SUMO3P55854 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SUMO3P55854 SNORA50D-202ENST00000627561 132 ntBASIC12.21□□□□□ -0.45
SUMO3P55854 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SUMO3P55854 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SUMO3P55854 DDC-206ENST00000431062 1620 ntTSL 5 BASIC12.21□□□□□ -0.46
SUMO3P55854 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SUMO3P55854 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.21□□□□□ -0.46
SUMO3P55854 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.21□□□□□ -0.46
SUMO3P55854 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC12.21□□□□□ -0.46
SUMO3P55854 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SUMO3P55854 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SUMO3P55854 AL445209.1-201ENST00000607269 3491 ntBASIC12.21□□□□□ -0.46
SUMO3P55854 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC12.21□□□□□ -0.46
SUMO3P55854 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
SUMO3P55854 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC12.21□□□□□ -0.46
SUMO3P55854 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.21□□□□□ -0.46
SUMO3P55854 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC12.21□□□□□ -0.46
SUMO3P55854 AC079781.5-202ENST00000641784 3743 ntBASIC12.21□□□□□ -0.46
SUMO3P55854 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.21□□□□□ -0.46
SUMO3P55854 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
SUMO3P55854 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SUMO3P55854 AGGF1P10-201ENST00000635005 2191 ntBASIC12.2□□□□□ -0.46
SUMO3P55854 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUMO3P55854 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SUMO3P55854 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUMO3P55854 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUMO3P55854 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SUMO3P55854 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SUMO3P55854 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
SUMO3P55854 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
SUMO3P55854 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.2□□□□□ -0.46
SUMO3P55854 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms