Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.23■□□□□ 0.03
TPM3P06753 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.23■□□□□ 0.03
TPM3P06753 AC021723.1-201ENST00000486306 515 ntBASIC15.23■□□□□ 0.03
TPM3P06753 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.23■□□□□ 0.03
TPM3P06753 DNM1P51-201ENST00000558149 522 ntBASIC15.23■□□□□ 0.03
TPM3P06753 RN7SL455P-201ENST00000580629 282 ntBASIC15.23■□□□□ 0.03
TPM3P06753 GPALPP1-207ENST00000611650 899 ntBASIC15.23■□□□□ 0.03
TPM3P06753 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.23■□□□□ 0.03
TPM3P06753 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.23■□□□□ 0.03
TPM3P06753 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPM3P06753 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPM3P06753 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TPM3P06753 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TPM3P06753 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC15.23■□□□□ 0.03
TPM3P06753 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPM3P06753 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TPM3P06753 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TPM3P06753 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPM3P06753 NRADDP-202ENST00000641269 1585 ntBASIC15.23■□□□□ 0.03
TPM3P06753 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPM3P06753 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
TPM3P06753 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TPM3P06753 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPM3P06753 FAM90A7P-201ENST00000382628 1395 ntBASIC15.23■□□□□ 0.03
TPM3P06753 FAM90A23P-201ENST00000400136 1395 ntBASIC15.23■□□□□ 0.03
TPM3P06753 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TPM3P06753 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC15.22■□□□□ 0.03
TPM3P06753 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 RBM22P2-201ENST00000393978 1814 ntBASIC15.22■□□□□ 0.03
TPM3P06753 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TPM3P06753 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 NBPF17P-201ENST00000401087 2119 ntBASIC15.22■□□□□ 0.03
TPM3P06753 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC15.22■□□□□ 0.03
TPM3P06753 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.22■□□□□ 0.03
TPM3P06753 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TPM3P06753 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.22■□□□□ 0.03
TPM3P06753 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
TPM3P06753 BX679664.3-201ENST00000414070 555 ntBASIC15.22■□□□□ 0.03
TPM3P06753 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.22■□□□□ 0.03
TPM3P06753 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.22■□□□□ 0.03
TPM3P06753 AC113935.1-201ENST00000471722 555 ntBASIC15.22■□□□□ 0.03
TPM3P06753 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.22■□□□□ 0.03
TPM3P06753 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC15.22■□□□□ 0.03
TPM3P06753 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 AC132938.2-201ENST00000579188 680 ntBASIC15.22■□□□□ 0.03
TPM3P06753 EEF1DP1-201ENST00000585891 896 ntBASIC15.22■□□□□ 0.03
TPM3P06753 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.22■□□□□ 0.03
TPM3P06753 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
TPM3P06753 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC15.22■□□□□ 0.03
TPM3P06753 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC15.22■□□□□ 0.03
TPM3P06753 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TPM3P06753 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC15.22■□□□□ 0.03
TPM3P06753 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC15.22■□□□□ 0.03
TPM3P06753 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TPM3P06753 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
TPM3P06753 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPM3P06753 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC15.21■□□□□ 0.03
TPM3P06753 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC15.21■□□□□ 0.03
TPM3P06753 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPM3P06753 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC15.21■□□□□ 0.03
TPM3P06753 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPM3P06753 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
TPM3P06753 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPM3P06753 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TPM3P06753 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPM3P06753 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.21■□□□□ 0.03
TPM3P06753 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPM3P06753 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TPM3P06753 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TPM3P06753 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC15.21■□□□□ 0.03
TPM3P06753 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TPM3P06753 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms