Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 AC137723.2-201ENST00000623540 398 ntBASIC16.19■□□□□ 0.18
POLR3DP05423 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
POLR3DP05423 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
POLR3DP05423 AC125807.2-201ENST00000513358 3514 ntBASIC16.19■□□□□ 0.18
POLR3DP05423 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR3DP05423 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR3DP05423 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR3DP05423 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR3DP05423 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR3DP05423 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR3DP05423 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
POLR3DP05423 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.19■□□□□ 0.18
POLR3DP05423 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR3DP05423 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR3DP05423 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
POLR3DP05423 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
POLR3DP05423 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC16.18■□□□□ 0.18
POLR3DP05423 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR3DP05423 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC16.18■□□□□ 0.18
POLR3DP05423 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
POLR3DP05423 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
POLR3DP05423 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR3DP05423 NUTM2HP-201ENST00000442076 2498 ntBASIC16.18■□□□□ 0.18
POLR3DP05423 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR3DP05423 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
POLR3DP05423 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
POLR3DP05423 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
POLR3DP05423 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
POLR3DP05423 AC092810.2-201ENST00000431570 362 ntBASIC16.18■□□□□ 0.18
POLR3DP05423 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR3DP05423 RPL29P2-202ENST00000498671 657 ntBASIC16.18■□□□□ 0.18
POLR3DP05423 PIGCP1-201ENST00000527583 895 ntBASIC16.18■□□□□ 0.18
POLR3DP05423 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR3DP05423 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC16.18■□□□□ 0.18
POLR3DP05423 FAM187B2P-201ENST00000577135 713 ntBASIC16.18■□□□□ 0.18
POLR3DP05423 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR3DP05423 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC16.18■□□□□ 0.18
POLR3DP05423 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.18■□□□□ 0.18
POLR3DP05423 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC16.18■□□□□ 0.18
POLR3DP05423 AP000769.1-203ENST00000637245 208 ntBASIC16.18■□□□□ 0.18
POLR3DP05423 MANEA-AS1-201ENST00000564541 2268 ntBASIC16.18■□□□□ 0.18
POLR3DP05423 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC16.18■□□□□ 0.18
POLR3DP05423 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR3DP05423 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
POLR3DP05423 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
POLR3DP05423 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
POLR3DP05423 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR3DP05423 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC16.18■□□□□ 0.18
POLR3DP05423 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR3DP05423 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR3DP05423 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR3DP05423 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR3DP05423 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC16.18■□□□□ 0.18
POLR3DP05423 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
POLR3DP05423 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR3DP05423 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR3DP05423 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
POLR3DP05423 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC16.17■□□□□ 0.18
POLR3DP05423 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR3DP05423 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
POLR3DP05423 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR3DP05423 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR3DP05423 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC16.17■□□□□ 0.18
POLR3DP05423 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
POLR3DP05423 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR3DP05423 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
POLR3DP05423 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR3DP05423 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR3DP05423 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
POLR3DP05423 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR3DP05423 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR3DP05423 RNA5SP491-201ENST00000362936 118 ntBASIC16.17■□□□□ 0.18
POLR3DP05423 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC16.17■□□□□ 0.18
POLR3DP05423 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC16.17■□□□□ 0.18
POLR3DP05423 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC16.17■□□□□ 0.18
POLR3DP05423 AC026470.1-201ENST00000478038 846 ntBASIC16.17■□□□□ 0.18
POLR3DP05423 RN7SL288P-201ENST00000490496 291 ntBASIC16.17■□□□□ 0.18
POLR3DP05423 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC16.17■□□□□ 0.18
POLR3DP05423 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC16.17■□□□□ 0.18
POLR3DP05423 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC16.17■□□□□ 0.18
POLR3DP05423 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC16.17■□□□□ 0.18
POLR3DP05423 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
POLR3DP05423 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC16.17■□□□□ 0.18
POLR3DP05423 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC16.17■□□□□ 0.18
POLR3DP05423 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
POLR3DP05423 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC16.17■□□□□ 0.18
POLR3DP05423 RARS-210ENST00000626454 177 ntTSL 5 BASIC16.17■□□□□ 0.18
POLR3DP05423 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC16.17■□□□□ 0.18
POLR3DP05423 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
POLR3DP05423 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC16.17■□□□□ 0.18
POLR3DP05423 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR3DP05423 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR3DP05423 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC16.17■□□□□ 0.18
POLR3DP05423 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC16.17■□□□□ 0.18
POLR3DP05423 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
POLR3DP05423 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
POLR3DP05423 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC16.17■□□□□ 0.18
POLR3DP05423 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
POLR3DP05423 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
POLR3DP05423 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms