Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.54■□□□□ 0.24
MYCNP04198 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
MYCNP04198 RWDD1-204ENST00000487832 1427 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 MFSD8-220ENST00000641243 1422 ntBASIC16.54■□□□□ 0.24
MYCNP04198 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.54■□□□□ 0.24
MYCNP04198 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 CNOT9-202ENST00000295701 1126 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.54■□□□□ 0.24
MYCNP04198 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
MYCNP04198 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC16.54■□□□□ 0.24
MYCNP04198 AL627389.1-201ENST00000413508 1182 ntBASIC16.54■□□□□ 0.24
MYCNP04198 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC16.54■□□□□ 0.24
MYCNP04198 E2F6P1-201ENST00000428850 745 ntBASIC16.54■□□□□ 0.24
MYCNP04198 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC16.54■□□□□ 0.24
MYCNP04198 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.54■□□□□ 0.24
MYCNP04198 E2F6P3-201ENST00000441743 743 ntBASIC16.54■□□□□ 0.24
MYCNP04198 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC16.54■□□□□ 0.24
MYCNP04198 KRT18P66-201ENST00000452970 1269 ntBASIC16.54■□□□□ 0.24
MYCNP04198 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.54■□□□□ 0.24
MYCNP04198 AC006122.1-201ENST00000493323 440 ntBASIC16.54■□□□□ 0.24
MYCNP04198 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 MTND4LP2-201ENST00000502312 285 ntBASIC16.54■□□□□ 0.24
MYCNP04198 MTCYBP16-201ENST00000509187 1129 ntBASIC16.54■□□□□ 0.24
MYCNP04198 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC16.54■□□□□ 0.24
MYCNP04198 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
MYCNP04198 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC16.54■□□□□ 0.24
MYCNP04198 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.54■□□□□ 0.24
MYCNP04198 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.54■□□□□ 0.24
MYCNP04198 MIR4522-201ENST00000584932 87 ntBASIC16.54■□□□□ 0.24
MYCNP04198 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.54■□□□□ 0.24
MYCNP04198 AC087392.5-201ENST00000612517 489 ntBASIC16.54■□□□□ 0.24
MYCNP04198 AC025262.3-201ENST00000623666 360 ntBASIC16.54■□□□□ 0.24
MYCNP04198 AL161773.1-201ENST00000624845 863 ntBASIC16.54■□□□□ 0.24
MYCNP04198 AC092299.1-201ENST00000632679 757 ntBASIC16.54■□□□□ 0.24
MYCNP04198 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.54■□□□□ 0.24
MYCNP04198 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
MYCNP04198 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 AC120114.1-201ENST00000450909 1762 ntTSL 3 BASIC16.54■□□□□ 0.24
MYCNP04198 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
MYCNP04198 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MYCNP04198 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
MYCNP04198 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.53■□□□□ 0.24
MYCNP04198 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 AC013726.1-201ENST00000563747 2285 ntBASIC16.53■□□□□ 0.24
MYCNP04198 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 CYP2T1P-202ENST00000641596 2535 ntBASIC16.53■□□□□ 0.24
MYCNP04198 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 KRT18P9-201ENST00000604826 1300 ntBASIC16.53■□□□□ 0.24
MYCNP04198 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 CTBP1-AS2-206ENST00000581398 5652 ntBASIC16.53■□□□□ 0.24
MYCNP04198 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
MYCNP04198 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.53■□□□□ 0.24
MYCNP04198 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.53■□□□□ 0.24
MYCNP04198 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.53■□□□□ 0.24
MYCNP04198 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.53■□□□□ 0.24
MYCNP04198 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.53■□□□□ 0.24
MYCNP04198 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
MYCNP04198 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC16.53■□□□□ 0.24
MYCNP04198 HNRNPH1P2-201ENST00000396845 1210 ntBASIC16.53■□□□□ 0.24
MYCNP04198 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC16.53■□□□□ 0.24
MYCNP04198 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MYCNP04198 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
MYCNP04198 AL031770.1-201ENST00000430842 851 ntTSL 2 BASIC16.53■□□□□ 0.24
MYCNP04198 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms