Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ASIC1P78348 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ASIC1P78348 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ASIC1P78348 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ASIC1P78348 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ASIC1P78348 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ASIC1P78348 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.02
ASIC1P78348 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ASIC1P78348 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ASIC1P78348 SUPT20HL1-201ENST00000436466 2618 ntBASIC15.14■□□□□ 0.01
ASIC1P78348 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ASIC1P78348 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ASIC1P78348 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
ASIC1P78348 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ASIC1P78348 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ASIC1P78348 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
ASIC1P78348 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ASIC1P78348 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.14■□□□□ 0.01
ASIC1P78348 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.14■□□□□ 0.01
ASIC1P78348 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ASIC1P78348 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ASIC1P78348 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ASIC1P78348 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ASIC1P78348 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ASIC1P78348 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ASIC1P78348 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC15.14■□□□□ 0.01
ASIC1P78348 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ASIC1P78348 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.14■□□□□ 0.01
ASIC1P78348 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ASIC1P78348 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC15.14■□□□□ 0.01
ASIC1P78348 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ASIC1P78348 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.14■□□□□ 0.01
ASIC1P78348 AC073210.1-201ENST00000414799 232 ntBASIC15.14■□□□□ 0.01
ASIC1P78348 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC15.14■□□□□ 0.01
ASIC1P78348 EEF1GP8-201ENST00000506566 1154 ntBASIC15.14■□□□□ 0.01
ASIC1P78348 AC019193.1-201ENST00000506678 823 ntBASIC15.14■□□□□ 0.01
ASIC1P78348 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.14■□□□□ 0.01
ASIC1P78348 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.14■□□□□ 0.01
ASIC1P78348 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC15.14■□□□□ 0.01
ASIC1P78348 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ASIC1P78348 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
ASIC1P78348 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC15.14■□□□□ 0.01
ASIC1P78348 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC15.14■□□□□ 0.01
ASIC1P78348 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC15.14■□□□□ 0.01
ASIC1P78348 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC15.14■□□□□ 0.01
ASIC1P78348 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ASIC1P78348 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ASIC1P78348 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ASIC1P78348 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ASIC1P78348 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC15.14■□□□□ 0.01
ASIC1P78348 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ASIC1P78348 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ASIC1P78348 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC15.14■□□□□ 0.01
ASIC1P78348 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC15.13■□□□□ 0.01
ASIC1P78348 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
ASIC1P78348 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ASIC1P78348 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ASIC1P78348 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC15.13■□□□□ 0.01
ASIC1P78348 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.13■□□□□ 0.01
ASIC1P78348 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC15.13■□□□□ 0.01
ASIC1P78348 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ASIC1P78348 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
ASIC1P78348 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC15.13■□□□□ 0.01
ASIC1P78348 AC022364.1-202ENST00000617468 2409 ntBASIC15.13■□□□□ 0.01
ASIC1P78348 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ASIC1P78348 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ASIC1P78348 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ASIC1P78348 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ASIC1P78348 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ASIC1P78348 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ASIC1P78348 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.13■□□□□ 0.01
ASIC1P78348 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ASIC1P78348 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ASIC1P78348 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ASIC1P78348 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ASIC1P78348 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.13■□□□□ 0.01
ASIC1P78348 AC041040.1-201ENST00000425197 460 ntBASIC15.13■□□□□ 0.01
ASIC1P78348 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.13■□□□□ 0.01
ASIC1P78348 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC15.13■□□□□ 0.01
ASIC1P78348 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.13■□□□□ 0.01
ASIC1P78348 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.13■□□□□ 0.01
ASIC1P78348 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.13■□□□□ 0.01
ASIC1P78348 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.13■□□□□ 0.01
ASIC1P78348 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.13■□□□□ 0.01
ASIC1P78348 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.13■□□□□ 0.01
ASIC1P78348 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC15.13■□□□□ 0.01
ASIC1P78348 AC138894.2-201ENST00000602838 371 ntBASIC15.13■□□□□ 0.01
ASIC1P78348 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
ASIC1P78348 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.13■□□□□ 0.01
ASIC1P78348 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ASIC1P78348 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC15.13■□□□□ 0.01
ASIC1P78348 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ASIC1P78348 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
ASIC1P78348 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ASIC1P78348 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC15.13■□□□□ 0.01
ASIC1P78348 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ASIC1P78348 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ASIC1P78348 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC15.12■□□□□ 0.01
ASIC1P78348 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ASIC1P78348 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms