Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 USP3-204ENST00000540797 5474 ntTSL 2 BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 PCDHA5-203ENST00000614258 4248 ntBASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 AC064850.1-201ENST00000413279 1398 ntBASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 HLA-DMA-202ENST00000395303 1007 ntBASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 RN7SL288P-201ENST00000490496 291 ntBASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 AC010234.1-201ENST00000494599 870 ntBASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 NSD1-211ENST00000511258 809 ntTSL 3 BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 AC078814.4-201ENST00000546650 327 ntBASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 KF455155.1-201ENST00000604493 303 ntBASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 AC139713.2-207ENST00000641556 1292 ntBASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 AC125807.2-201ENST00000513358 3514 ntBASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 CICP8-201ENST00000455800 2813 ntBASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 DMBT1P1-203ENST00000636837 4628 ntBASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 AC079781.5-202ENST00000641784 3743 ntBASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMG20BQ9P0W2 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 COX20P1-201ENST00000366529 357 ntBASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 RPSAP12-201ENST00000435879 888 ntBASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 AP000437.1-201ENST00000624057 2085 ntBASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 PTENP1-202ENST00000532280 3996 ntBASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 CA6-205ENST00000480186 1493 ntTSL 2 BASIC16.42■□□□□ 0.22
HMG20BQ9P0W2 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20BQ9P0W2 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms