Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC14.17□□□□□ -0.14
MTHFRP42898 AC007679.1-201ENST00000458609 502 ntBASIC14.17□□□□□ -0.14
MTHFRP42898 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
MTHFRP42898 MTHFD2P7-201ENST00000483867 983 ntBASIC14.17□□□□□ -0.14
MTHFRP42898 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MTHFRP42898 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.17□□□□□ -0.14
MTHFRP42898 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC14.17□□□□□ -0.14
MTHFRP42898 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC14.17□□□□□ -0.14
MTHFRP42898 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC14.17□□□□□ -0.14
MTHFRP42898 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC14.17□□□□□ -0.14
MTHFRP42898 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC14.17□□□□□ -0.14
MTHFRP42898 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
MTHFRP42898 CCND3P2-201ENST00000579393 537 ntBASIC14.17□□□□□ -0.14
MTHFRP42898 CLPP-205ENST00000596605 646 ntTSL 2 BASIC14.17□□□□□ -0.14
MTHFRP42898 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC14.17□□□□□ -0.14
MTHFRP42898 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MTHFRP42898 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MTHFRP42898 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MTHFRP42898 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
MTHFRP42898 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MTHFRP42898 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MTHFRP42898 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
MTHFRP42898 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MTHFRP42898 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MTHFRP42898 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MTHFRP42898 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
MTHFRP42898 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MTHFRP42898 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MTHFRP42898 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MTHFRP42898 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
MTHFRP42898 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
MTHFRP42898 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
MTHFRP42898 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MTHFRP42898 AL359183.1-201ENST00000623796 2132 ntBASIC14.17□□□□□ -0.14
MTHFRP42898 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.17□□□□□ -0.14
MTHFRP42898 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MTHFRP42898 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.16□□□□□ -0.14
MTHFRP42898 AC016397.2-201ENST00000624848 1985 ntBASIC14.16□□□□□ -0.14
MTHFRP42898 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
MTHFRP42898 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
MTHFRP42898 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.16□□□□□ -0.14
MTHFRP42898 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.16□□□□□ -0.14
MTHFRP42898 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
MTHFRP42898 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
MTHFRP42898 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC14.16□□□□□ -0.14
MTHFRP42898 RPL14-203ENST00000416518 812 ntTSL 3 BASIC14.16□□□□□ -0.14
MTHFRP42898 AC005077.3-201ENST00000449614 213 ntBASIC14.16□□□□□ -0.14
MTHFRP42898 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC14.16□□□□□ -0.14
MTHFRP42898 AC113398.1-201ENST00000464124 406 ntBASIC14.16□□□□□ -0.14
MTHFRP42898 RNA5SP288-201ENST00000516075 93 ntBASIC14.16□□□□□ -0.14
MTHFRP42898 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC14.16□□□□□ -0.14
MTHFRP42898 AC142086.5-202ENST00000562500 217 ntBASIC14.16□□□□□ -0.14
MTHFRP42898 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC14.16□□□□□ -0.14
MTHFRP42898 AC254633.1-201ENST00000606790 345 ntBASIC14.16□□□□□ -0.14
MTHFRP42898 AC006986.1-201ENST00000612764 241 ntBASIC14.16□□□□□ -0.14
MTHFRP42898 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
MTHFRP42898 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC14.16□□□□□ -0.14
MTHFRP42898 AC008622.3-201ENST00000621170 600 ntBASIC14.16□□□□□ -0.14
MTHFRP42898 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
MTHFRP42898 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
MTHFRP42898 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
MTHFRP42898 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC14.16□□□□□ -0.14
MTHFRP42898 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
MTHFRP42898 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC14.16□□□□□ -0.14
MTHFRP42898 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.16□□□□□ -0.14
MTHFRP42898 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
MTHFRP42898 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MTHFRP42898 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MTHFRP42898 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
MTHFRP42898 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
MTHFRP42898 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.15□□□□□ -0.14
MTHFRP42898 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MTHFRP42898 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC14.15□□□□□ -0.14
MTHFRP42898 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
MTHFRP42898 SNORA50D-201ENST00000408059 134 ntBASIC14.15□□□□□ -0.14
MTHFRP42898 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC14.15□□□□□ -0.14
MTHFRP42898 RPSAP6-201ENST00000417882 882 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms