Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6BP35913 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6BP35913 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.48■□□□□ 0.23
PDE6BP35913 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6BP35913 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
PDE6BP35913 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PDE6BP35913 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PDE6BP35913 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PDE6BP35913 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC16.47■□□□□ 0.23
PDE6BP35913 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
PDE6BP35913 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PDE6BP35913 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PDE6BP35913 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 GZMH-202ENST00000382548 687 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
PDE6BP35913 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 AC079325.1-201ENST00000430386 857 ntBASIC16.47■□□□□ 0.23
PDE6BP35913 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC16.47■□□□□ 0.23
PDE6BP35913 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 AC104117.1-201ENST00000517817 900 ntBASIC16.47■□□□□ 0.23
PDE6BP35913 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC16.47■□□□□ 0.23
PDE6BP35913 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC16.47■□□□□ 0.23
PDE6BP35913 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC16.47■□□□□ 0.23
PDE6BP35913 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC16.47■□□□□ 0.23
PDE6BP35913 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
PDE6BP35913 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC16.47■□□□□ 0.23
PDE6BP35913 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
PDE6BP35913 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
PDE6BP35913 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6BP35913 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PDE6BP35913 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PDE6BP35913 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PDE6BP35913 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6BP35913 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.46■□□□□ 0.23
PDE6BP35913 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6BP35913 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6BP35913 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.46■□□□□ 0.23
PDE6BP35913 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6BP35913 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
PDE6BP35913 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6BP35913 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PDE6BP35913 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6BP35913 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6BP35913 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6BP35913 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PDE6BP35913 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6BP35913 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6BP35913 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6BP35913 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6BP35913 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6BP35913 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PDE6BP35913 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC16.46■□□□□ 0.23
PDE6BP35913 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC16.46■□□□□ 0.23
PDE6BP35913 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6BP35913 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
PDE6BP35913 RPL10P8-201ENST00000522888 313 ntBASIC16.46■□□□□ 0.23
PDE6BP35913 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC16.46■□□□□ 0.23
PDE6BP35913 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC16.46■□□□□ 0.23
PDE6BP35913 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC16.46■□□□□ 0.23
PDE6BP35913 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC16.46■□□□□ 0.23
PDE6BP35913 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC16.46■□□□□ 0.23
PDE6BP35913 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
PDE6BP35913 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6BP35913 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6BP35913 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6BP35913 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC16.46■□□□□ 0.23
PDE6BP35913 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6BP35913 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PDE6BP35913 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6BP35913 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6BP35913 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PDE6BP35913 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC16.46■□□□□ 0.22
PDE6BP35913 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
PDE6BP35913 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6BP35913 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6BP35913 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6BP35913 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6BP35913 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PDE6BP35913 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms