Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 LINC01783-202ENST00000614408 828 ntBASIC12.12□□□□□ -0.47
APOC1P02654 MIR6769A-201ENST00000617340 73 ntBASIC12.12□□□□□ -0.47
APOC1P02654 BX284668.2-205ENST00000619677 828 ntBASIC12.12□□□□□ -0.47
APOC1P02654 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.12□□□□□ -0.47
APOC1P02654 AL033527.4-201ENST00000641026 673 ntBASIC12.12□□□□□ -0.47
APOC1P02654 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.12□□□□□ -0.47
APOC1P02654 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.12□□□□□ -0.47
APOC1P02654 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
APOC1P02654 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.12□□□□□ -0.47
APOC1P02654 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
APOC1P02654 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.12□□□□□ -0.47
APOC1P02654 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
APOC1P02654 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
APOC1P02654 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.12□□□□□ -0.47
APOC1P02654 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.12□□□□□ -0.47
APOC1P02654 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
APOC1P02654 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
APOC1P02654 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
APOC1P02654 AC245140.2-201ENST00000624054 1939 ntBASIC12.11□□□□□ -0.47
APOC1P02654 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC12.11□□□□□ -0.47
APOC1P02654 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
APOC1P02654 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.11□□□□□ -0.47
APOC1P02654 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.11□□□□□ -0.47
APOC1P02654 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.11□□□□□ -0.47
APOC1P02654 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.11□□□□□ -0.47
APOC1P02654 POM121L14P-201ENST00000406100 1558 ntBASIC12.11□□□□□ -0.47
APOC1P02654 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
APOC1P02654 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
APOC1P02654 MIR1307-201ENST00000408840 149 ntBASIC12.11□□□□□ -0.47
APOC1P02654 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.11□□□□□ -0.47
APOC1P02654 AL596276.2-201ENST00000447525 331 ntBASIC12.11□□□□□ -0.47
APOC1P02654 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.11□□□□□ -0.47
APOC1P02654 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
APOC1P02654 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC12.11□□□□□ -0.47
APOC1P02654 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.11□□□□□ -0.47
APOC1P02654 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.11□□□□□ -0.47
APOC1P02654 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.11□□□□□ -0.47
APOC1P02654 AL645939.5-201ENST00000606834 243 ntBASIC12.11□□□□□ -0.47
APOC1P02654 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
APOC1P02654 AC091544.8-201ENST00000619490 361 ntBASIC12.11□□□□□ -0.47
APOC1P02654 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.11□□□□□ -0.47
APOC1P02654 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC12.11□□□□□ -0.47
APOC1P02654 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
APOC1P02654 LINC00638-201ENST00000555578 2518 ntBASIC12.11□□□□□ -0.47
APOC1P02654 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.11□□□□□ -0.47
APOC1P02654 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.11□□□□□ -0.47
APOC1P02654 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.11□□□□□ -0.47
APOC1P02654 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
APOC1P02654 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
APOC1P02654 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
APOC1P02654 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.11□□□□□ -0.47
APOC1P02654 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.11□□□□□ -0.47
APOC1P02654 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
APOC1P02654 TEKT4P2-202ENST00000559466 1312 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms