Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB9F8W1W9 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB9F8W1W9 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC12.37□□□□□ -0.43
NPIPB9F8W1W9 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC12.37□□□□□ -0.43
NPIPB9F8W1W9 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB9F8W1W9 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB9F8W1W9 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB9F8W1W9 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB9F8W1W9 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB9F8W1W9 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
NPIPB9F8W1W9 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC12.37□□□□□ -0.43
NPIPB9F8W1W9 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NPIPB9F8W1W9 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC12.37□□□□□ -0.43
NPIPB9F8W1W9 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 AC139491.6-202ENST00000637171 2077 ntBASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 ANKRD20A7P-201ENST00000402318 2414 ntBASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 RPL10-203ENST00000406022 748 ntTSL 3 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 IQSEC3P1-201ENST00000538799 536 ntBASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 RN7SL134P-201ENST00000579756 303 ntBASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 AC012358.2-201ENST00000430010 1434 ntBASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NPIPB9F8W1W9 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NPIPB9F8W1W9 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
NPIPB9F8W1W9 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
NPIPB9F8W1W9 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NPIPB9F8W1W9 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
NPIPB9F8W1W9 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
NPIPB9F8W1W9 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC12.35□□□□□ -0.43
NPIPB9F8W1W9 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NPIPB9F8W1W9 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
NPIPB9F8W1W9 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC12.35□□□□□ -0.43
NPIPB9F8W1W9 FUCA1P1-201ENST00000374476 1351 ntBASIC12.35□□□□□ -0.43
NPIPB9F8W1W9 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NPIPB9F8W1W9 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NPIPB9F8W1W9 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NPIPB9F8W1W9 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NPIPB9F8W1W9 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
NPIPB9F8W1W9 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
NPIPB9F8W1W9 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NPIPB9F8W1W9 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
NPIPB9F8W1W9 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NPIPB9F8W1W9 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms