Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 AC245140.2-201ENST00000624054 1939 ntBASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 RNVU1-8-201ENST00000364272 125 ntBASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 ABCD1P4-201ENST00000399687 604 ntBASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 ACTBP14-201ENST00000411655 1089 ntBASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 HIST2H2BA-201ENST00000412169 381 ntBASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 AC098935.1-201ENST00000446057 611 ntBASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 AC092171.5-201ENST00000608012 942 ntBASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 ST5-261ENST00000626808 1071 ntTSL 5 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 Z98885.3-201ENST00000624882 1757 ntBASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PARPBPQ9NWS1 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PARPBPQ9NWS1 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.24□□□□□ -0.45
PARPBPQ9NWS1 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PARPBPQ9NWS1 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PARPBPQ9NWS1 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PARPBPQ9NWS1 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PARPBPQ9NWS1 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PARPBPQ9NWS1 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.24□□□□□ -0.45
PARPBPQ9NWS1 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
PARPBPQ9NWS1 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PARPBPQ9NWS1 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms