Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P04436 KRT18P46-201ENST00000435568 1279 ntBASIC12.42□□□□□ -0.42
P04436 NALT1-202ENST00000450304 437 ntTSL 3 BASIC12.42□□□□□ -0.42
P04436 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC12.42□□□□□ -0.42
P04436 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC12.42□□□□□ -0.42
P04436 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P04436 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04436 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC12.42□□□□□ -0.42
P04436 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
P04436 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P04436 AC010632.2-201ENST00000588369 1224 ntBASIC12.42□□□□□ -0.42
P04436 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC12.42□□□□□ -0.42
P04436 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC12.42□□□□□ -0.42
P04436 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC12.42□□□□□ -0.42
P04436 AC002472.4-201ENST00000641915 272 ntBASIC12.42□□□□□ -0.42
P04436 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.42□□□□□ -0.42
P04436 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04436 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.42□□□□□ -0.42
P04436 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P04436 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.42□□□□□ -0.42
P04436 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
P04436 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04436 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04436 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P04436 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
P04436 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.42□□□□□ -0.42
P04436 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04436 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04436 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.42□□□□□ -0.42
P04436 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.42□□□□□ -0.42
P04436 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04436 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.41□□□□□ -0.42
P04436 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04436 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04436 KRT8P25-201ENST00000473150 1456 ntBASIC12.41□□□□□ -0.42
P04436 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
P04436 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04436 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04436 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04436 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.41□□□□□ -0.42
P04436 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04436 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04436 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04436 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04436 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04436 AC022080.1-201ENST00000366255 781 ntBASIC12.41□□□□□ -0.42
P04436 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC12.41□□□□□ -0.42
P04436 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04436 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC12.41□□□□□ -0.42
P04436 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC12.41□□□□□ -0.42
P04436 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC12.41□□□□□ -0.42
P04436 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC12.41□□□□□ -0.42
P04436 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC12.41□□□□□ -0.42
P04436 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC12.41□□□□□ -0.42
P04436 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC12.41□□□□□ -0.42
P04436 RPL29P2-202ENST00000498671 657 ntBASIC12.41□□□□□ -0.42
P04436 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC12.41□□□□□ -0.42
P04436 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC12.41□□□□□ -0.42
P04436 AC005840.4-201ENST00000541242 2494 ntBASIC12.41□□□□□ -0.42
P04436 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC12.41□□□□□ -0.42
P04436 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC12.41□□□□□ -0.42
P04436 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
P04436 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04436 AC055811.3-201ENST00000584952 686 ntBASIC12.41□□□□□ -0.42
P04436 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC12.41□□□□□ -0.42
P04436 AC126755.5-201ENST00000622756 267 ntBASIC12.41□□□□□ -0.42
P04436 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
P04436 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
P04436 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04436 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04436 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
P04436 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04436 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC12.41□□□□□ -0.42
P04436 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04436 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC12.41□□□□□ -0.42
P04436 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04436 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04436 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04436 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.41□□□□□ -0.42
P04436 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04436 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04436 AC130686.1-201ENST00000622936 2466 ntBASIC12.4□□□□□ -0.42
P04436 AL359845.1-201ENST00000458202 1648 ntBASIC12.4□□□□□ -0.42
P04436 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04436 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
P04436 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
P04436 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04436 AC005014.1-201ENST00000432006 2976 ntBASIC12.4□□□□□ -0.42
P04436 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04436 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC12.4□□□□□ -0.42
P04436 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
P04436 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
P04436 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04436 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P04436 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
P04436 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04436 RNA5SP491-201ENST00000362936 118 ntBASIC12.4□□□□□ -0.42
P04436 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
P04436 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P04436 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms