Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB1Q9Y5G3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
PCDHGB1Q9Y5G3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB1Q9Y5G3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PCDHGB1Q9Y5G3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB1Q9Y5G3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHGB1Q9Y5G3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB1Q9Y5G3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.3■□□□□ 0.84
PCDHGB1Q9Y5G3 U85056.1-201ENST00000616429 682 ntBASIC20.3■□□□□ 0.84
PCDHGB1Q9Y5G3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGB1Q9Y5G3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PCDHGB1Q9Y5G3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PCDHGB1Q9Y5G3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB1Q9Y5G3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB1Q9Y5G3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGB1Q9Y5G3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHGB1Q9Y5G3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PCDHGB1Q9Y5G3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHGB1Q9Y5G3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHGB1Q9Y5G3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB1Q9Y5G3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDHGB1Q9Y5G3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB1Q9Y5G3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB1Q9Y5G3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB1Q9Y5G3 AC133552.2-201ENST00000619106 1032 ntBASIC20.29■□□□□ 0.84
PCDHGB1Q9Y5G3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB1Q9Y5G3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PCDHGB1Q9Y5G3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PCDHGB1Q9Y5G3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB1Q9Y5G3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB1Q9Y5G3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB1Q9Y5G3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB1Q9Y5G3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB1Q9Y5G3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB1Q9Y5G3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGB1Q9Y5G3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB1Q9Y5G3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGB1Q9Y5G3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
PCDHGB1Q9Y5G3 AC073130.3-201ENST00000624389 2278 ntBASIC20.28■□□□□ 0.84
PCDHGB1Q9Y5G3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB1Q9Y5G3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB1Q9Y5G3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB1Q9Y5G3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB1Q9Y5G3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB1Q9Y5G3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB1Q9Y5G3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB1Q9Y5G3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHGB1Q9Y5G3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB1Q9Y5G3 AC009831.1-201ENST00000580420 1582 ntBASIC20.27■□□□□ 0.84
PCDHGB1Q9Y5G3 AC018755.3-202ENST00000596210 929 ntBASIC20.27■□□□□ 0.84
PCDHGB1Q9Y5G3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGB1Q9Y5G3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PCDHGB1Q9Y5G3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHGB1Q9Y5G3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGB1Q9Y5G3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGB1Q9Y5G3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGB1Q9Y5G3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PCDHGB1Q9Y5G3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGB1Q9Y5G3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGB1Q9Y5G3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PCDHGB1Q9Y5G3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGB1Q9Y5G3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGB1Q9Y5G3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PCDHGB1Q9Y5G3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB1Q9Y5G3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB1Q9Y5G3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
PCDHGB1Q9Y5G3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHGB1Q9Y5G3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB1Q9Y5G3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB1Q9Y5G3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHGB1Q9Y5G3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB1Q9Y5G3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB1Q9Y5G3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB1Q9Y5G3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB1Q9Y5G3 AC079630.1-202ENST00000618127 1840 ntBASIC20.25■□□□□ 0.83
PCDHGB1Q9Y5G3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGB1Q9Y5G3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB1Q9Y5G3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB1Q9Y5G3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB1Q9Y5G3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PCDHGB1Q9Y5G3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB1Q9Y5G3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PCDHGB1Q9Y5G3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHGB1Q9Y5G3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB1Q9Y5G3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB1Q9Y5G3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB1Q9Y5G3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PCDHGB1Q9Y5G3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB1Q9Y5G3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB1Q9Y5G3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHGB1Q9Y5G3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB1Q9Y5G3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB1Q9Y5G3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB1Q9Y5G3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGB1Q9Y5G3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB1Q9Y5G3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PCDHGB1Q9Y5G3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PCDHGB1Q9Y5G3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB1Q9Y5G3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB1Q9Y5G3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms