Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 AC133561.1-201ENST00000568600 2415 ntBASIC24.51■■□□□ 1.51
PCDHB13Q9Y5F0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.51■■□□□ 1.51
PCDHB13Q9Y5F0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHB13Q9Y5F0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.51■■□□□ 1.51
PCDHB13Q9Y5F0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.51■■□□□ 1.51
PCDHB13Q9Y5F0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHB13Q9Y5F0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.51■■□□□ 1.51
PCDHB13Q9Y5F0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHB13Q9Y5F0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.51■■□□□ 1.51
PCDHB13Q9Y5F0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHB13Q9Y5F0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHB13Q9Y5F0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.51■■□□□ 1.51
PCDHB13Q9Y5F0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHB13Q9Y5F0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.5■■□□□ 1.51
PCDHB13Q9Y5F0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHB13Q9Y5F0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
PCDHB13Q9Y5F0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
PCDHB13Q9Y5F0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHB13Q9Y5F0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHB13Q9Y5F0 AC009086.3-201ENST00000623486 1008 ntBASIC24.5■■□□□ 1.51
PCDHB13Q9Y5F0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.5■■□□□ 1.51
PCDHB13Q9Y5F0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHB13Q9Y5F0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHB13Q9Y5F0 AC068473.5-201ENST00000616428 2072 ntBASIC24.5■■□□□ 1.51
PCDHB13Q9Y5F0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.5■■□□□ 1.51
PCDHB13Q9Y5F0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHB13Q9Y5F0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.5■■□□□ 1.51
PCDHB13Q9Y5F0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHB13Q9Y5F0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHB13Q9Y5F0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHB13Q9Y5F0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.49■■□□□ 1.51
PCDHB13Q9Y5F0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
PCDHB13Q9Y5F0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHB13Q9Y5F0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHB13Q9Y5F0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHB13Q9Y5F0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHB13Q9Y5F0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHB13Q9Y5F0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.49■■□□□ 1.51
PCDHB13Q9Y5F0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
PCDHB13Q9Y5F0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHB13Q9Y5F0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHB13Q9Y5F0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
PCDHB13Q9Y5F0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.48■■□□□ 1.51
PCDHB13Q9Y5F0 AL136116.3-201ENST00000402907 1138 ntBASIC24.48■■□□□ 1.51
PCDHB13Q9Y5F0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.48■■□□□ 1.51
PCDHB13Q9Y5F0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHB13Q9Y5F0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHB13Q9Y5F0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.48■■□□□ 1.51
PCDHB13Q9Y5F0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHB13Q9Y5F0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.47■■□□□ 1.51
PCDHB13Q9Y5F0 AL499627.2-201ENST00000606283 725 ntBASIC24.47■■□□□ 1.51
PCDHB13Q9Y5F0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.47■■□□□ 1.51
PCDHB13Q9Y5F0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.47■■□□□ 1.51
PCDHB13Q9Y5F0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.46■■□□□ 1.51
PCDHB13Q9Y5F0 AC008406.3-201ENST00000620001 1374 ntBASIC24.46■■□□□ 1.51
PCDHB13Q9Y5F0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
PCDHB13Q9Y5F0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
PCDHB13Q9Y5F0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHB13Q9Y5F0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.45■■□□□ 1.51
PCDHB13Q9Y5F0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.45■■□□□ 1.5
PCDHB13Q9Y5F0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHB13Q9Y5F0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHB13Q9Y5F0 AC006455.2-201ENST00000429931 906 ntBASIC24.45■■□□□ 1.5
PCDHB13Q9Y5F0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHB13Q9Y5F0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHB13Q9Y5F0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHB13Q9Y5F0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHB13Q9Y5F0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHB13Q9Y5F0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHB13Q9Y5F0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHB13Q9Y5F0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHB13Q9Y5F0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHB13Q9Y5F0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
PCDHB13Q9Y5F0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHB13Q9Y5F0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHB13Q9Y5F0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC24.44■■□□□ 1.5
PCDHB13Q9Y5F0 DUX4L19-201ENST00000557448 1267 ntBASIC24.44■■□□□ 1.5
PCDHB13Q9Y5F0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHB13Q9Y5F0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHB13Q9Y5F0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHB13Q9Y5F0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHB13Q9Y5F0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHB13Q9Y5F0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.43■■□□□ 1.5
PCDHB13Q9Y5F0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHB13Q9Y5F0 pRNA.6-201ENST00000610482 90 ntBASIC24.43■■□□□ 1.5
PCDHB13Q9Y5F0 pRNA.5-201ENST00000612139 90 ntBASIC24.43■■□□□ 1.5
PCDHB13Q9Y5F0 pRNA.11-201ENST00000618423 90 ntBASIC24.43■■□□□ 1.5
PCDHB13Q9Y5F0 pRNA.13-201ENST00000619112 90 ntBASIC24.43■■□□□ 1.5
PCDHB13Q9Y5F0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHB13Q9Y5F0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.43■■□□□ 1.5
PCDHB13Q9Y5F0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.43■■□□□ 1.5
PCDHB13Q9Y5F0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.43■■□□□ 1.5
PCDHB13Q9Y5F0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHB13Q9Y5F0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.43■■□□□ 1.5
PCDHB13Q9Y5F0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHB13Q9Y5F0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
PCDHB13Q9Y5F0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHB13Q9Y5F0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHB13Q9Y5F0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHB13Q9Y5F0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms