Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHB7Q9Y5E2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
PCDHB7Q9Y5E2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
PCDHB7Q9Y5E2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDHB7Q9Y5E2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDHB7Q9Y5E2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHB7Q9Y5E2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHB7Q9Y5E2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDHB7Q9Y5E2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHB7Q9Y5E2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHB7Q9Y5E2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHB7Q9Y5E2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHB7Q9Y5E2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHB7Q9Y5E2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHB7Q9Y5E2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.11■■□□□ 1.45
PCDHB7Q9Y5E2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHB7Q9Y5E2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHB7Q9Y5E2 KRT18P14-201ENST00000534205 1250 ntBASIC24.11■■□□□ 1.45
PCDHB7Q9Y5E2 NTF6G-201ENST00000591094 616 ntBASIC24.11■■□□□ 1.45
PCDHB7Q9Y5E2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHB7Q9Y5E2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHB7Q9Y5E2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHB7Q9Y5E2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHB7Q9Y5E2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHB7Q9Y5E2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHB7Q9Y5E2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDHB7Q9Y5E2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.1■■□□□ 1.45
PCDHB7Q9Y5E2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDHB7Q9Y5E2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHB7Q9Y5E2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDHB7Q9Y5E2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHB7Q9Y5E2 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHB7Q9Y5E2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
PCDHB7Q9Y5E2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHB7Q9Y5E2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHB7Q9Y5E2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.09■■□□□ 1.45
PCDHB7Q9Y5E2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHB7Q9Y5E2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHB7Q9Y5E2 AC092437.1-201ENST00000624794 1048 ntBASIC24.09■■□□□ 1.45
PCDHB7Q9Y5E2 AC105233.4-201ENST00000642045 216 ntBASIC24.09■■□□□ 1.45
PCDHB7Q9Y5E2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHB7Q9Y5E2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
PCDHB7Q9Y5E2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
PCDHB7Q9Y5E2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHB7Q9Y5E2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHB7Q9Y5E2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHB7Q9Y5E2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHB7Q9Y5E2 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.08■■□□□ 1.45
PCDHB7Q9Y5E2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.08■■□□□ 1.45
PCDHB7Q9Y5E2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHB7Q9Y5E2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.08■■□□□ 1.45
PCDHB7Q9Y5E2 TERF1P2-201ENST00000583350 1212 ntBASIC24.08■■□□□ 1.45
PCDHB7Q9Y5E2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.08■■□□□ 1.45
PCDHB7Q9Y5E2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.08■■□□□ 1.45
PCDHB7Q9Y5E2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHB7Q9Y5E2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.08■■□□□ 1.44
PCDHB7Q9Y5E2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
PCDHB7Q9Y5E2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.07■■□□□ 1.44
PCDHB7Q9Y5E2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHB7Q9Y5E2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHB7Q9Y5E2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHB7Q9Y5E2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
PCDHB7Q9Y5E2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
PCDHB7Q9Y5E2 AC004911.1-201ENST00000416316 871 ntBASIC24.07■■□□□ 1.44
PCDHB7Q9Y5E2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
PCDHB7Q9Y5E2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
PCDHB7Q9Y5E2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHB7Q9Y5E2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.07■■□□□ 1.44
PCDHB7Q9Y5E2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHB7Q9Y5E2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDHB7Q9Y5E2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHB7Q9Y5E2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHB7Q9Y5E2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
PCDHB7Q9Y5E2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.06■■□□□ 1.44
PCDHB7Q9Y5E2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHB7Q9Y5E2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHB7Q9Y5E2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.06■■□□□ 1.44
PCDHB7Q9Y5E2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHB7Q9Y5E2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHB7Q9Y5E2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.05■■□□□ 1.44
PCDHB7Q9Y5E2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.05■■□□□ 1.44
PCDHB7Q9Y5E2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHB7Q9Y5E2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHB7Q9Y5E2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHB7Q9Y5E2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.05■■□□□ 1.44
PCDHB7Q9Y5E2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.05■■□□□ 1.44
PCDHB7Q9Y5E2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.05■■□□□ 1.44
PCDHB7Q9Y5E2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHB7Q9Y5E2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.05■■□□□ 1.44
PCDHB7Q9Y5E2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHB7Q9Y5E2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHB7Q9Y5E2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.04■■□□□ 1.44
PCDHB7Q9Y5E2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHB7Q9Y5E2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHB7Q9Y5E2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.04■■□□□ 1.44
PCDHB7Q9Y5E2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.04■■□□□ 1.44
PCDHB7Q9Y5E2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.04■■□□□ 1.44
PCDHB7Q9Y5E2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.04■■□□□ 1.44
PCDHB7Q9Y5E2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.04■■□□□ 1.44
PCDHB7Q9Y5E2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms