Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
SPG7Q9UQ90 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SPG7Q9UQ90 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SPG7Q9UQ90 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC29.33■■■□□ 2.29
SPG7Q9UQ90 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
SPG7Q9UQ90 MED17-227ENST00000640521 2047 ntTSL 5 BASIC29.33■■■□□ 2.29
SPG7Q9UQ90 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SPG7Q9UQ90 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC29.32■■■□□ 2.28
SPG7Q9UQ90 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SPG7Q9UQ90 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SPG7Q9UQ90 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
SPG7Q9UQ90 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
SPG7Q9UQ90 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
SPG7Q9UQ90 NTF6G-201ENST00000591094 616 ntBASIC29.32■■■□□ 2.28
SPG7Q9UQ90 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
SPG7Q9UQ90 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
SPG7Q9UQ90 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SPG7Q9UQ90 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
SPG7Q9UQ90 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SPG7Q9UQ90 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SPG7Q9UQ90 MPST-204ENST00000404393 1329 ntTSL 5 BASIC29.31■■■□□ 2.28
SPG7Q9UQ90 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC29.31■■■□□ 2.28
SPG7Q9UQ90 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SPG7Q9UQ90 STX4-202ENST00000394998 1498 ntTSL 2 BASIC29.3■■■□□ 2.28
SPG7Q9UQ90 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SPG7Q9UQ90 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC29.3■■■□□ 2.28
SPG7Q9UQ90 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
SPG7Q9UQ90 GXYLT1P2-201ENST00000433312 1230 ntBASIC29.3■■■□□ 2.28
SPG7Q9UQ90 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC29.3■■■□□ 2.28
SPG7Q9UQ90 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC29.3■■■□□ 2.28
SPG7Q9UQ90 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SPG7Q9UQ90 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC29.3■■■□□ 2.28
SPG7Q9UQ90 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC29.3■■■□□ 2.28
SPG7Q9UQ90 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
SPG7Q9UQ90 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SPG7Q9UQ90 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SPG7Q9UQ90 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SPG7Q9UQ90 NT5C3AP1-201ENST00000394500 1012 ntBASIC29.29■■■□□ 2.28
SPG7Q9UQ90 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
SPG7Q9UQ90 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC29.29■■■□□ 2.28
SPG7Q9UQ90 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
SPG7Q9UQ90 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
SPG7Q9UQ90 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SPG7Q9UQ90 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
SPG7Q9UQ90 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
SPG7Q9UQ90 AC004911.1-201ENST00000416316 871 ntBASIC29.28■■■□□ 2.28
SPG7Q9UQ90 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
SPG7Q9UQ90 AC105233.4-201ENST00000642045 216 ntBASIC29.28■■■□□ 2.28
SPG7Q9UQ90 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC29.28■■■□□ 2.28
SPG7Q9UQ90 EED-207ENST00000528180 1745 ntTSL 5 BASIC29.28■■■□□ 2.28
SPG7Q9UQ90 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC29.28■■■□□ 2.28
SPG7Q9UQ90 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC29.27■■■□□ 2.28
SPG7Q9UQ90 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC29.27■■■□□ 2.28
SPG7Q9UQ90 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
SPG7Q9UQ90 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SPG7Q9UQ90 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC29.27■■■□□ 2.28
SPG7Q9UQ90 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SPG7Q9UQ90 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SPG7Q9UQ90 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
SPG7Q9UQ90 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC29.26■■■□□ 2.27
SPG7Q9UQ90 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC29.26■■■□□ 2.27
SPG7Q9UQ90 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC29.26■■■□□ 2.27
SPG7Q9UQ90 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC29.26■■■□□ 2.27
SPG7Q9UQ90 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC29.26■■■□□ 2.27
SPG7Q9UQ90 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC29.26■■■□□ 2.27
SPG7Q9UQ90 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
SPG7Q9UQ90 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SPG7Q9UQ90 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC29.26■■■□□ 2.27
SPG7Q9UQ90 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
SPG7Q9UQ90 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
SPG7Q9UQ90 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
SPG7Q9UQ90 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
SPG7Q9UQ90 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC29.25■■■□□ 2.27
SPG7Q9UQ90 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
SPG7Q9UQ90 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SPG7Q9UQ90 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SPG7Q9UQ90 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
SPG7Q9UQ90 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SPG7Q9UQ90 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
SPG7Q9UQ90 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC29.24■■■□□ 2.27
SPG7Q9UQ90 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
SPG7Q9UQ90 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC29.24■■■□□ 2.27
SPG7Q9UQ90 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SPG7Q9UQ90 DLX3-202ENST00000512495 834 ntTSL 2 BASIC29.24■■■□□ 2.27
SPG7Q9UQ90 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC29.24■■■□□ 2.27
SPG7Q9UQ90 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC29.24■■■□□ 2.27
SPG7Q9UQ90 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC29.24■■■□□ 2.27
SPG7Q9UQ90 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
SPG7Q9UQ90 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SPG7Q9UQ90 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
SPG7Q9UQ90 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC29.24■■■□□ 2.27
SPG7Q9UQ90 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SPG7Q9UQ90 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SPG7Q9UQ90 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
SPG7Q9UQ90 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC29.23■■■□□ 2.27
SPG7Q9UQ90 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SPG7Q9UQ90 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SPG7Q9UQ90 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC29.23■■■□□ 2.27
SPG7Q9UQ90 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC29.23■■■□□ 2.27
SPG7Q9UQ90 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC29.23■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms