Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN2Q9UHD9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN2Q9UHD9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN2Q9UHD9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN2Q9UHD9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN2Q9UHD9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.68■□□□□ 0.58
UBQLN2Q9UHD9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.68■□□□□ 0.58
UBQLN2Q9UHD9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.68■□□□□ 0.58
UBQLN2Q9UHD9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN2Q9UHD9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN2Q9UHD9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN2Q9UHD9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN2Q9UHD9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.68■□□□□ 0.58
UBQLN2Q9UHD9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN2Q9UHD9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBQLN2Q9UHD9 AC092053.2-201ENST00000640557 1818 ntBASIC18.67■□□□□ 0.58
UBQLN2Q9UHD9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN2Q9UHD9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.67■□□□□ 0.58
UBQLN2Q9UHD9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN2Q9UHD9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN2Q9UHD9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
UBQLN2Q9UHD9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.67■□□□□ 0.58
UBQLN2Q9UHD9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.67■□□□□ 0.58
UBQLN2Q9UHD9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.67■□□□□ 0.58
UBQLN2Q9UHD9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
UBQLN2Q9UHD9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN2Q9UHD9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN2Q9UHD9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.66■□□□□ 0.58
UBQLN2Q9UHD9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN2Q9UHD9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
UBQLN2Q9UHD9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
UBQLN2Q9UHD9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN2Q9UHD9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN2Q9UHD9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
UBQLN2Q9UHD9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN2Q9UHD9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN2Q9UHD9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
UBQLN2Q9UHD9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN2Q9UHD9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN2Q9UHD9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN2Q9UHD9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.66■□□□□ 0.58
UBQLN2Q9UHD9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN2Q9UHD9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
UBQLN2Q9UHD9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
UBQLN2Q9UHD9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.65■□□□□ 0.58
UBQLN2Q9UHD9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN2Q9UHD9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN2Q9UHD9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN2Q9UHD9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
UBQLN2Q9UHD9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN2Q9UHD9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN2Q9UHD9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN2Q9UHD9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.65■□□□□ 0.58
UBQLN2Q9UHD9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
UBQLN2Q9UHD9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN2Q9UHD9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN2Q9UHD9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN2Q9UHD9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
UBQLN2Q9UHD9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
UBQLN2Q9UHD9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBQLN2Q9UHD9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBQLN2Q9UHD9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN2Q9UHD9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN2Q9UHD9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.64■□□□□ 0.57
UBQLN2Q9UHD9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN2Q9UHD9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.64■□□□□ 0.57
UBQLN2Q9UHD9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
UBQLN2Q9UHD9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.64■□□□□ 0.57
UBQLN2Q9UHD9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
UBQLN2Q9UHD9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN2Q9UHD9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN2Q9UHD9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.64■□□□□ 0.57
UBQLN2Q9UHD9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN2Q9UHD9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.64■□□□□ 0.57
UBQLN2Q9UHD9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
UBQLN2Q9UHD9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.63■□□□□ 0.57
UBQLN2Q9UHD9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN2Q9UHD9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.63■□□□□ 0.57
UBQLN2Q9UHD9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN2Q9UHD9 AC022413.1-201ENST00000624602 984 ntBASIC18.63■□□□□ 0.57
UBQLN2Q9UHD9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN2Q9UHD9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBQLN2Q9UHD9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.63■□□□□ 0.57
UBQLN2Q9UHD9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
UBQLN2Q9UHD9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.63■□□□□ 0.57
UBQLN2Q9UHD9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN2Q9UHD9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN2Q9UHD9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN2Q9UHD9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
UBQLN2Q9UHD9 GPX1-201ENST00000419349 1106 ntBASIC18.62■□□□□ 0.57
UBQLN2Q9UHD9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN2Q9UHD9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN2Q9UHD9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
UBQLN2Q9UHD9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
UBQLN2Q9UHD9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN2Q9UHD9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
UBQLN2Q9UHD9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBQLN2Q9UHD9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
UBQLN2Q9UHD9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBQLN2Q9UHD9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms