Protein–RNA interactions for Protein: Q9NVV0

TMEM38B, Trimeric intracellular cation channel type B, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38BQ9NVV0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM38BQ9NVV0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM38BQ9NVV0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TMEM38BQ9NVV0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM38BQ9NVV0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM38BQ9NVV0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.53■□□□□ 0.72
TMEM38BQ9NVV0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM38BQ9NVV0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM38BQ9NVV0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM38BQ9NVV0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.53■□□□□ 0.72
TMEM38BQ9NVV0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.53■□□□□ 0.72
TMEM38BQ9NVV0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.53■□□□□ 0.72
TMEM38BQ9NVV0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.53■□□□□ 0.72
TMEM38BQ9NVV0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.53■□□□□ 0.72
TMEM38BQ9NVV0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM38BQ9NVV0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM38BQ9NVV0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM38BQ9NVV0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.53■□□□□ 0.72
TMEM38BQ9NVV0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TMEM38BQ9NVV0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM38BQ9NVV0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM38BQ9NVV0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM38BQ9NVV0 AC006455.2-201ENST00000429931 906 ntBASIC19.52■□□□□ 0.72
TMEM38BQ9NVV0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM38BQ9NVV0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM38BQ9NVV0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM38BQ9NVV0 AC092171.4-201ENST00000609130 632 ntBASIC19.52■□□□□ 0.72
TMEM38BQ9NVV0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
TMEM38BQ9NVV0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TMEM38BQ9NVV0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
TMEM38BQ9NVV0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM38BQ9NVV0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM38BQ9NVV0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
TMEM38BQ9NVV0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM38BQ9NVV0 AL499627.2-201ENST00000606283 725 ntBASIC19.51■□□□□ 0.71
TMEM38BQ9NVV0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM38BQ9NVV0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM38BQ9NVV0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM38BQ9NVV0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TMEM38BQ9NVV0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.51■□□□□ 0.71
TMEM38BQ9NVV0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.51■□□□□ 0.71
TMEM38BQ9NVV0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM38BQ9NVV0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
TMEM38BQ9NVV0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM38BQ9NVV0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM38BQ9NVV0 AL136116.3-201ENST00000402907 1138 ntBASIC19.5■□□□□ 0.71
TMEM38BQ9NVV0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM38BQ9NVV0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM38BQ9NVV0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEM38BQ9NVV0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEM38BQ9NVV0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEM38BQ9NVV0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM38BQ9NVV0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TMEM38BQ9NVV0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEM38BQ9NVV0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEM38BQ9NVV0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TMEM38BQ9NVV0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
TMEM38BQ9NVV0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM38BQ9NVV0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TMEM38BQ9NVV0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM38BQ9NVV0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM38BQ9NVV0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM38BQ9NVV0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
TMEM38BQ9NVV0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM38BQ9NVV0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM38BQ9NVV0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM38BQ9NVV0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM38BQ9NVV0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TMEM38BQ9NVV0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEM38BQ9NVV0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMEM38BQ9NVV0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM38BQ9NVV0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.48■□□□□ 0.71
TMEM38BQ9NVV0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM38BQ9NVV0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM38BQ9NVV0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM38BQ9NVV0 pRNA.6-201ENST00000610482 90 ntBASIC19.48■□□□□ 0.71
TMEM38BQ9NVV0 pRNA.5-201ENST00000612139 90 ntBASIC19.48■□□□□ 0.71
TMEM38BQ9NVV0 pRNA.11-201ENST00000618423 90 ntBASIC19.48■□□□□ 0.71
TMEM38BQ9NVV0 pRNA.13-201ENST00000619112 90 ntBASIC19.48■□□□□ 0.71
TMEM38BQ9NVV0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEM38BQ9NVV0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TMEM38BQ9NVV0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
TMEM38BQ9NVV0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TMEM38BQ9NVV0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TMEM38BQ9NVV0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM38BQ9NVV0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TMEM38BQ9NVV0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM38BQ9NVV0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TMEM38BQ9NVV0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.47■□□□□ 0.71
TMEM38BQ9NVV0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM38BQ9NVV0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM38BQ9NVV0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM38BQ9NVV0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM38BQ9NVV0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
TMEM38BQ9NVV0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM38BQ9NVV0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TMEM38BQ9NVV0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM38BQ9NVV0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMEM38BQ9NVV0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM38BQ9NVV0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms