Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLE3Q9NRF9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
POLE3Q9NRF9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
POLE3Q9NRF9 AC009102.2-201ENST00000606772 1639 ntBASIC20.6■□□□□ 0.89
POLE3Q9NRF9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLE3Q9NRF9 DUX4L4-201ENST00000566884 1269 ntBASIC20.6■□□□□ 0.89
POLE3Q9NRF9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.6■□□□□ 0.89
POLE3Q9NRF9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLE3Q9NRF9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
POLE3Q9NRF9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.6■□□□□ 0.89
POLE3Q9NRF9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
POLE3Q9NRF9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
POLE3Q9NRF9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLE3Q9NRF9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
POLE3Q9NRF9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
POLE3Q9NRF9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.59■□□□□ 0.89
POLE3Q9NRF9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.59■□□□□ 0.89
POLE3Q9NRF9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLE3Q9NRF9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLE3Q9NRF9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLE3Q9NRF9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
POLE3Q9NRF9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.59■□□□□ 0.89
POLE3Q9NRF9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
POLE3Q9NRF9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLE3Q9NRF9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.58■□□□□ 0.89
POLE3Q9NRF9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLE3Q9NRF9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLE3Q9NRF9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
POLE3Q9NRF9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.58■□□□□ 0.89
POLE3Q9NRF9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
POLE3Q9NRF9 ESRRAP2-201ENST00000418437 1549 ntBASIC20.58■□□□□ 0.88
POLE3Q9NRF9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLE3Q9NRF9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
POLE3Q9NRF9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
POLE3Q9NRF9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.57■□□□□ 0.88
POLE3Q9NRF9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.57■□□□□ 0.88
POLE3Q9NRF9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLE3Q9NRF9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLE3Q9NRF9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.57■□□□□ 0.88
POLE3Q9NRF9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.57■□□□□ 0.88
POLE3Q9NRF9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
POLE3Q9NRF9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLE3Q9NRF9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLE3Q9NRF9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLE3Q9NRF9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLE3Q9NRF9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.56■□□□□ 0.88
POLE3Q9NRF9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLE3Q9NRF9 KRT16P3-201ENST00000439127 1283 ntBASIC20.56■□□□□ 0.88
POLE3Q9NRF9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
POLE3Q9NRF9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
POLE3Q9NRF9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLE3Q9NRF9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
POLE3Q9NRF9 C17orf82-201ENST00000623772 1530 ntBASIC20.56■□□□□ 0.88
POLE3Q9NRF9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.56■□□□□ 0.88
POLE3Q9NRF9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.56■□□□□ 0.88
POLE3Q9NRF9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.56■□□□□ 0.88
POLE3Q9NRF9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLE3Q9NRF9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.55■□□□□ 0.88
POLE3Q9NRF9 AC009086.3-201ENST00000623486 1008 ntBASIC20.55■□□□□ 0.88
POLE3Q9NRF9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.55■□□□□ 0.88
POLE3Q9NRF9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
POLE3Q9NRF9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
POLE3Q9NRF9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
POLE3Q9NRF9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
POLE3Q9NRF9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
POLE3Q9NRF9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLE3Q9NRF9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
POLE3Q9NRF9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.54■□□□□ 0.88
POLE3Q9NRF9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLE3Q9NRF9 GUSBP5-201ENST00000418136 578 ntBASIC20.54■□□□□ 0.88
POLE3Q9NRF9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.54■□□□□ 0.88
POLE3Q9NRF9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.54■□□□□ 0.88
POLE3Q9NRF9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.54■□□□□ 0.88
POLE3Q9NRF9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
POLE3Q9NRF9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
POLE3Q9NRF9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
POLE3Q9NRF9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
POLE3Q9NRF9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLE3Q9NRF9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.54■□□□□ 0.88
POLE3Q9NRF9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
POLE3Q9NRF9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLE3Q9NRF9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLE3Q9NRF9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
POLE3Q9NRF9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLE3Q9NRF9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLE3Q9NRF9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLE3Q9NRF9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.53■□□□□ 0.88
POLE3Q9NRF9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLE3Q9NRF9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLE3Q9NRF9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLE3Q9NRF9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLE3Q9NRF9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLE3Q9NRF9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLE3Q9NRF9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
POLE3Q9NRF9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
POLE3Q9NRF9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
POLE3Q9NRF9 C1orf229-201ENST00000623686 2258 ntBASIC20.52■□□□□ 0.88
POLE3Q9NRF9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.52■□□□□ 0.88
POLE3Q9NRF9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
POLE3Q9NRF9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms