Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SOX17Q9H6I2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SOX17Q9H6I2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SOX17Q9H6I2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.46■■□□□ 1.03
SOX17Q9H6I2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.46■■□□□ 1.03
SOX17Q9H6I2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.46■■□□□ 1.03
SOX17Q9H6I2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SOX17Q9H6I2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.46■■□□□ 1.03
SOX17Q9H6I2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SOX17Q9H6I2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
SOX17Q9H6I2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
SOX17Q9H6I2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SOX17Q9H6I2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.45■■□□□ 1.02
SOX17Q9H6I2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SOX17Q9H6I2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SOX17Q9H6I2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SOX17Q9H6I2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SOX17Q9H6I2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SOX17Q9H6I2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SOX17Q9H6I2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SOX17Q9H6I2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SOX17Q9H6I2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.44■■□□□ 1.02
SOX17Q9H6I2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SOX17Q9H6I2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SOX17Q9H6I2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
SOX17Q9H6I2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
SOX17Q9H6I2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
SOX17Q9H6I2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SOX17Q9H6I2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
SOX17Q9H6I2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.43■■□□□ 1.02
SOX17Q9H6I2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.43■■□□□ 1.02
SOX17Q9H6I2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.43■■□□□ 1.02
SOX17Q9H6I2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SOX17Q9H6I2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.43■■□□□ 1.02
SOX17Q9H6I2 AL161729.1-201ENST00000604104 1402 ntBASIC21.43■■□□□ 1.02
SOX17Q9H6I2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SOX17Q9H6I2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.43■■□□□ 1.02
SOX17Q9H6I2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SOX17Q9H6I2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SOX17Q9H6I2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SOX17Q9H6I2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SOX17Q9H6I2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SOX17Q9H6I2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SOX17Q9H6I2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SOX17Q9H6I2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SOX17Q9H6I2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.42■■□□□ 1.02
SOX17Q9H6I2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
SOX17Q9H6I2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.42■■□□□ 1.02
SOX17Q9H6I2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SOX17Q9H6I2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SOX17Q9H6I2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
SOX17Q9H6I2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SOX17Q9H6I2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SOX17Q9H6I2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SOX17Q9H6I2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.41■■□□□ 1.02
SOX17Q9H6I2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SOX17Q9H6I2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.41■■□□□ 1.02
SOX17Q9H6I2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SOX17Q9H6I2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SOX17Q9H6I2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SOX17Q9H6I2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SOX17Q9H6I2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.4■■□□□ 1.02
SOX17Q9H6I2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.4■■□□□ 1.02
SOX17Q9H6I2 UNC93B3-201ENST00000308076 687 ntBASIC21.4■■□□□ 1.02
SOX17Q9H6I2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.4■■□□□ 1.02
SOX17Q9H6I2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SOX17Q9H6I2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
SOX17Q9H6I2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SOX17Q9H6I2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SOX17Q9H6I2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.4■■□□□ 1.02
SOX17Q9H6I2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
SOX17Q9H6I2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SOX17Q9H6I2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SOX17Q9H6I2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SOX17Q9H6I2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.39■■□□□ 1.02
SOX17Q9H6I2 C1orf229-201ENST00000623686 2258 ntBASIC21.39■■□□□ 1.02
SOX17Q9H6I2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SOX17Q9H6I2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
SOX17Q9H6I2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.39■■□□□ 1.01
SOX17Q9H6I2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SOX17Q9H6I2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.39■■□□□ 1.01
SOX17Q9H6I2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.39■■□□□ 1.01
SOX17Q9H6I2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SOX17Q9H6I2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SOX17Q9H6I2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SOX17Q9H6I2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.39■■□□□ 1.01
SOX17Q9H6I2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SOX17Q9H6I2 PBX2P1-201ENST00000493219 1291 ntBASIC21.39■■□□□ 1.01
SOX17Q9H6I2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SOX17Q9H6I2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.39■■□□□ 1.01
SOX17Q9H6I2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SOX17Q9H6I2 AC009102.2-201ENST00000606772 1639 ntBASIC21.39■■□□□ 1.01
SOX17Q9H6I2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SOX17Q9H6I2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SOX17Q9H6I2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SOX17Q9H6I2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SOX17Q9H6I2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.38■■□□□ 1.01
SOX17Q9H6I2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SOX17Q9H6I2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SOX17Q9H6I2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms