Protein–RNA interactions for Protein: Q9H3R0

KDM4C, Lysine-specific demethylase 4C, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4CQ9H3R0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.05■■□□□ 1.28
KDM4CQ9H3R0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
KDM4CQ9H3R0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
KDM4CQ9H3R0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
KDM4CQ9H3R0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
KDM4CQ9H3R0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
KDM4CQ9H3R0 AC131274.2-201ENST00000580697 1507 ntBASIC23.04■■□□□ 1.28
KDM4CQ9H3R0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
KDM4CQ9H3R0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
KDM4CQ9H3R0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.04■■□□□ 1.28
KDM4CQ9H3R0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.04■■□□□ 1.28
KDM4CQ9H3R0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.04■■□□□ 1.28
KDM4CQ9H3R0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
KDM4CQ9H3R0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KDM4CQ9H3R0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KDM4CQ9H3R0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KDM4CQ9H3R0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.03■■□□□ 1.28
KDM4CQ9H3R0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.03■■□□□ 1.28
KDM4CQ9H3R0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
KDM4CQ9H3R0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
KDM4CQ9H3R0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KDM4CQ9H3R0 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.02■■□□□ 1.28
KDM4CQ9H3R0 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.02■■□□□ 1.28
KDM4CQ9H3R0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
KDM4CQ9H3R0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KDM4CQ9H3R0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KDM4CQ9H3R0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KDM4CQ9H3R0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
KDM4CQ9H3R0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.02■■□□□ 1.28
KDM4CQ9H3R0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.02■■□□□ 1.28
KDM4CQ9H3R0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.02■■□□□ 1.28
KDM4CQ9H3R0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KDM4CQ9H3R0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KDM4CQ9H3R0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.01■■□□□ 1.27
KDM4CQ9H3R0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KDM4CQ9H3R0 AL022069.1-201ENST00000568025 1636 ntBASIC23.01■■□□□ 1.27
KDM4CQ9H3R0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KDM4CQ9H3R0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KDM4CQ9H3R0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
KDM4CQ9H3R0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KDM4CQ9H3R0 SRD5A1P1-201ENST00000442297 786 ntBASIC23.01■■□□□ 1.27
KDM4CQ9H3R0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KDM4CQ9H3R0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KDM4CQ9H3R0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
KDM4CQ9H3R0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
KDM4CQ9H3R0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23■■□□□ 1.27
KDM4CQ9H3R0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
KDM4CQ9H3R0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23■■□□□ 1.27
KDM4CQ9H3R0 AC007375.3-201ENST00000600936 2314 ntBASIC23■■□□□ 1.27
KDM4CQ9H3R0 WWC2-AS2-201ENST00000578387 2183 ntBASIC23■■□□□ 1.27
KDM4CQ9H3R0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23■■□□□ 1.27
KDM4CQ9H3R0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
KDM4CQ9H3R0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
KDM4CQ9H3R0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
KDM4CQ9H3R0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
KDM4CQ9H3R0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
KDM4CQ9H3R0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
KDM4CQ9H3R0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.99■■□□□ 1.27
KDM4CQ9H3R0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
KDM4CQ9H3R0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
KDM4CQ9H3R0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.99■■□□□ 1.27
KDM4CQ9H3R0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
KDM4CQ9H3R0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.98■■□□□ 1.27
KDM4CQ9H3R0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
KDM4CQ9H3R0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
KDM4CQ9H3R0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
KDM4CQ9H3R0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
KDM4CQ9H3R0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
KDM4CQ9H3R0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.98■■□□□ 1.27
KDM4CQ9H3R0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.98■■□□□ 1.27
KDM4CQ9H3R0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
KDM4CQ9H3R0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.98■■□□□ 1.27
KDM4CQ9H3R0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
KDM4CQ9H3R0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.98■■□□□ 1.27
KDM4CQ9H3R0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
KDM4CQ9H3R0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.98■■□□□ 1.27
KDM4CQ9H3R0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KDM4CQ9H3R0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KDM4CQ9H3R0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KDM4CQ9H3R0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
KDM4CQ9H3R0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KDM4CQ9H3R0 AC005837.3-201ENST00000612163 286 ntBASIC22.97■■□□□ 1.27
KDM4CQ9H3R0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KDM4CQ9H3R0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KDM4CQ9H3R0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
KDM4CQ9H3R0 AL161729.1-201ENST00000604104 1402 ntBASIC22.97■■□□□ 1.27
KDM4CQ9H3R0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KDM4CQ9H3R0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KDM4CQ9H3R0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KDM4CQ9H3R0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.97■■□□□ 1.27
KDM4CQ9H3R0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.96■■□□□ 1.27
KDM4CQ9H3R0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
KDM4CQ9H3R0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
KDM4CQ9H3R0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
KDM4CQ9H3R0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
KDM4CQ9H3R0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
KDM4CQ9H3R0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
KDM4CQ9H3R0 AC106739.1-201ENST00000617035 715 ntBASIC22.96■■□□□ 1.27
KDM4CQ9H3R0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
KDM4CQ9H3R0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms