Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SPTBN4Q9H254 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
SPTBN4Q9H254 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.67■■□□□ 1.06
SPTBN4Q9H254 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.66■■□□□ 1.06
SPTBN4Q9H254 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPTBN4Q9H254 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SPTBN4Q9H254 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.66■■□□□ 1.06
SPTBN4Q9H254 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.66■■□□□ 1.06
SPTBN4Q9H254 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SPTBN4Q9H254 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPTBN4Q9H254 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPTBN4Q9H254 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.66■■□□□ 1.06
SPTBN4Q9H254 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.66■■□□□ 1.06
SPTBN4Q9H254 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.66■■□□□ 1.06
SPTBN4Q9H254 AC128676.1-201ENST00000454392 318 ntBASIC21.66■■□□□ 1.06
SPTBN4Q9H254 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.66■■□□□ 1.06
SPTBN4Q9H254 AC083880.1-201ENST00000608266 535 ntBASIC21.66■■□□□ 1.06
SPTBN4Q9H254 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SPTBN4Q9H254 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.66■■□□□ 1.06
SPTBN4Q9H254 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.66■■□□□ 1.06
SPTBN4Q9H254 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SPTBN4Q9H254 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTBN4Q9H254 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SPTBN4Q9H254 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTBN4Q9H254 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
SPTBN4Q9H254 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SPTBN4Q9H254 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
SPTBN4Q9H254 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.65■■□□□ 1.06
SPTBN4Q9H254 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.65■■□□□ 1.06
SPTBN4Q9H254 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.65■■□□□ 1.06
SPTBN4Q9H254 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.65■■□□□ 1.06
SPTBN4Q9H254 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.65■■□□□ 1.06
SPTBN4Q9H254 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.65■■□□□ 1.06
SPTBN4Q9H254 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
SPTBN4Q9H254 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SPTBN4Q9H254 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SPTBN4Q9H254 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPTBN4Q9H254 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
SPTBN4Q9H254 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.64■■□□□ 1.05
SPTBN4Q9H254 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SPTBN4Q9H254 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.64■■□□□ 1.05
SPTBN4Q9H254 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPTBN4Q9H254 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPTBN4Q9H254 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPTBN4Q9H254 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SPTBN4Q9H254 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.63■■□□□ 1.05
SPTBN4Q9H254 RARRES2P4-201ENST00000514074 484 ntBASIC21.63■■□□□ 1.05
SPTBN4Q9H254 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.63■■□□□ 1.05
SPTBN4Q9H254 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SPTBN4Q9H254 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPTBN4Q9H254 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.63■■□□□ 1.05
SPTBN4Q9H254 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.63■■□□□ 1.05
SPTBN4Q9H254 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.63■■□□□ 1.05
SPTBN4Q9H254 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.63■■□□□ 1.05
SPTBN4Q9H254 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
SPTBN4Q9H254 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.63■■□□□ 1.05
SPTBN4Q9H254 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPTBN4Q9H254 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.62■■□□□ 1.05
SPTBN4Q9H254 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SPTBN4Q9H254 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SPTBN4Q9H254 AC133637.1-201ENST00000624115 1537 ntBASIC21.62■■□□□ 1.05
SPTBN4Q9H254 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SPTBN4Q9H254 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPTBN4Q9H254 KRT18P21-201ENST00000515767 1272 ntBASIC21.62■■□□□ 1.05
SPTBN4Q9H254 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SPTBN4Q9H254 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SPTBN4Q9H254 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPTBN4Q9H254 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SPTBN4Q9H254 AC105036.2-201ENST00000569468 176 ntBASIC21.61■■□□□ 1.05
SPTBN4Q9H254 MIR4758-201ENST00000577688 71 ntBASIC21.61■■□□□ 1.05
SPTBN4Q9H254 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SPTBN4Q9H254 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SPTBN4Q9H254 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SPTBN4Q9H254 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.61■■□□□ 1.05
SPTBN4Q9H254 UBE2DNL-204ENST00000602536 740 ntBASIC21.61■■□□□ 1.05
SPTBN4Q9H254 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
SPTBN4Q9H254 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SPTBN4Q9H254 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SPTBN4Q9H254 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SPTBN4Q9H254 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SPTBN4Q9H254 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SPTBN4Q9H254 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.6■■□□□ 1.05
SPTBN4Q9H254 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.6■■□□□ 1.05
SPTBN4Q9H254 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SPTBN4Q9H254 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SPTBN4Q9H254 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SPTBN4Q9H254 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
SPTBN4Q9H254 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SPTBN4Q9H254 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.6■■□□□ 1.05
SPTBN4Q9H254 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.6■■□□□ 1.05
SPTBN4Q9H254 BX005040.4-201ENST00000637145 1518 ntBASIC21.6■■□□□ 1.05
SPTBN4Q9H254 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.6■■□□□ 1.05
SPTBN4Q9H254 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.6■■□□□ 1.05
SPTBN4Q9H254 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
SPTBN4Q9H254 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SPTBN4Q9H254 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SPTBN4Q9H254 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SPTBN4Q9H254 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SPTBN4Q9H254 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.59■■□□□ 1.05
SPTBN4Q9H254 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms