Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX47Q9H0S4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
DDX47Q9H0S4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.16■■□□□ 1.3
DDX47Q9H0S4 AC004448.1-201ENST00000458332 883 ntBASIC23.16■■□□□ 1.3
DDX47Q9H0S4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX47Q9H0S4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.16■■□□□ 1.3
DDX47Q9H0S4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.16■■□□□ 1.3
DDX47Q9H0S4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX47Q9H0S4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX47Q9H0S4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
DDX47Q9H0S4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX47Q9H0S4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
DDX47Q9H0S4 MIR4281-201ENST00000580852 62 ntBASIC23.15■■□□□ 1.3
DDX47Q9H0S4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX47Q9H0S4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
DDX47Q9H0S4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
DDX47Q9H0S4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.14■■□□□ 1.3
DDX47Q9H0S4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
DDX47Q9H0S4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.29
DDX47Q9H0S4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
DDX47Q9H0S4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
DDX47Q9H0S4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
DDX47Q9H0S4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.14■■□□□ 1.29
DDX47Q9H0S4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.14■■□□□ 1.29
DDX47Q9H0S4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX47Q9H0S4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.13■■□□□ 1.29
DDX47Q9H0S4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
DDX47Q9H0S4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX47Q9H0S4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX47Q9H0S4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX47Q9H0S4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
DDX47Q9H0S4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX47Q9H0S4 AC087742.1-201ENST00000575880 1738 ntBASIC23.13■■□□□ 1.29
DDX47Q9H0S4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.13■■□□□ 1.29
DDX47Q9H0S4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX47Q9H0S4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX47Q9H0S4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX47Q9H0S4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX47Q9H0S4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX47Q9H0S4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.12■■□□□ 1.29
DDX47Q9H0S4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
DDX47Q9H0S4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
DDX47Q9H0S4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.12■■□□□ 1.29
DDX47Q9H0S4 HSD17B1P1-201ENST00000590052 955 ntBASIC23.12■■□□□ 1.29
DDX47Q9H0S4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX47Q9H0S4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.12■■□□□ 1.29
DDX47Q9H0S4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.12■■□□□ 1.29
DDX47Q9H0S4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
DDX47Q9H0S4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX47Q9H0S4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.11■■□□□ 1.29
DDX47Q9H0S4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX47Q9H0S4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX47Q9H0S4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX47Q9H0S4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.11■■□□□ 1.29
DDX47Q9H0S4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX47Q9H0S4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
DDX47Q9H0S4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX47Q9H0S4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
DDX47Q9H0S4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
DDX47Q9H0S4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.11■■□□□ 1.29
DDX47Q9H0S4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX47Q9H0S4 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.1■■□□□ 1.29
DDX47Q9H0S4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX47Q9H0S4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX47Q9H0S4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX47Q9H0S4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
DDX47Q9H0S4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX47Q9H0S4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
DDX47Q9H0S4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX47Q9H0S4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.1■■□□□ 1.29
DDX47Q9H0S4 FBXW4P1-201ENST00000426721 2239 ntBASIC23.1■■□□□ 1.29
DDX47Q9H0S4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX47Q9H0S4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
DDX47Q9H0S4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX47Q9H0S4 KRT18P24-201ENST00000344739 1156 ntBASIC23.09■■□□□ 1.29
DDX47Q9H0S4 THA1P-201ENST00000590384 1145 ntBASIC23.09■■□□□ 1.29
DDX47Q9H0S4 PVT1_1.1-201ENST00000615125 194 ntBASIC23.09■■□□□ 1.29
DDX47Q9H0S4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
DDX47Q9H0S4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
DDX47Q9H0S4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX47Q9H0S4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
DDX47Q9H0S4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
DDX47Q9H0S4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.08■■□□□ 1.29
DDX47Q9H0S4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.08■■□□□ 1.29
DDX47Q9H0S4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.08■■□□□ 1.29
DDX47Q9H0S4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
DDX47Q9H0S4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
DDX47Q9H0S4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
DDX47Q9H0S4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
DDX47Q9H0S4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
DDX47Q9H0S4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.07■■□□□ 1.28
DDX47Q9H0S4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.07■■□□□ 1.28
DDX47Q9H0S4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX47Q9H0S4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
DDX47Q9H0S4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX47Q9H0S4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX47Q9H0S4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
DDX47Q9H0S4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX47Q9H0S4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
DDX47Q9H0S4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms