Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
AMBRA1Q9C0C7 ESRRAP2-201ENST00000418437 1549 ntBASIC20.78■□□□□ 0.92
AMBRA1Q9C0C7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AMBRA1Q9C0C7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.77■□□□□ 0.92
AMBRA1Q9C0C7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
AMBRA1Q9C0C7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.77■□□□□ 0.92
AMBRA1Q9C0C7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AMBRA1Q9C0C7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AMBRA1Q9C0C7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.77■□□□□ 0.92
AMBRA1Q9C0C7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
AMBRA1Q9C0C7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.76■□□□□ 0.91
AMBRA1Q9C0C7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AMBRA1Q9C0C7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AMBRA1Q9C0C7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AMBRA1Q9C0C7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AMBRA1Q9C0C7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AMBRA1Q9C0C7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AMBRA1Q9C0C7 AC103724.3-201ENST00000564481 992 ntBASIC20.76■□□□□ 0.91
AMBRA1Q9C0C7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.76■□□□□ 0.91
AMBRA1Q9C0C7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
AMBRA1Q9C0C7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AMBRA1Q9C0C7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AMBRA1Q9C0C7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
AMBRA1Q9C0C7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.75■□□□□ 0.91
AMBRA1Q9C0C7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
AMBRA1Q9C0C7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.75■□□□□ 0.91
AMBRA1Q9C0C7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.75■□□□□ 0.91
AMBRA1Q9C0C7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
AMBRA1Q9C0C7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.75■□□□□ 0.91
AMBRA1Q9C0C7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
AMBRA1Q9C0C7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.75■□□□□ 0.91
AMBRA1Q9C0C7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
AMBRA1Q9C0C7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AMBRA1Q9C0C7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AMBRA1Q9C0C7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.75■□□□□ 0.91
AMBRA1Q9C0C7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.74■□□□□ 0.91
AMBRA1Q9C0C7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AMBRA1Q9C0C7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AMBRA1Q9C0C7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
AMBRA1Q9C0C7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AMBRA1Q9C0C7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
AMBRA1Q9C0C7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AMBRA1Q9C0C7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AMBRA1Q9C0C7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.74■□□□□ 0.91
AMBRA1Q9C0C7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AMBRA1Q9C0C7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
AMBRA1Q9C0C7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AMBRA1Q9C0C7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
AMBRA1Q9C0C7 KRT18P24-201ENST00000344739 1156 ntBASIC20.73■□□□□ 0.91
AMBRA1Q9C0C7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
AMBRA1Q9C0C7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.73■□□□□ 0.91
AMBRA1Q9C0C7 MIR4281-201ENST00000580852 62 ntBASIC20.73■□□□□ 0.91
AMBRA1Q9C0C7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.73■□□□□ 0.91
AMBRA1Q9C0C7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.73■□□□□ 0.91
AMBRA1Q9C0C7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.73■□□□□ 0.91
AMBRA1Q9C0C7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
AMBRA1Q9C0C7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AMBRA1Q9C0C7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AMBRA1Q9C0C7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.72■□□□□ 0.91
AMBRA1Q9C0C7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.72■□□□□ 0.91
AMBRA1Q9C0C7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
AMBRA1Q9C0C7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AMBRA1Q9C0C7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AMBRA1Q9C0C7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
AMBRA1Q9C0C7 AC004448.1-201ENST00000458332 883 ntBASIC20.72■□□□□ 0.91
AMBRA1Q9C0C7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AMBRA1Q9C0C7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
AMBRA1Q9C0C7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AMBRA1Q9C0C7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
AMBRA1Q9C0C7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
AMBRA1Q9C0C7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.71■□□□□ 0.91
AMBRA1Q9C0C7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
AMBRA1Q9C0C7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AMBRA1Q9C0C7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
AMBRA1Q9C0C7 AL451085.2-201ENST00000605085 799 ntBASIC20.71■□□□□ 0.91
AMBRA1Q9C0C7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
AMBRA1Q9C0C7 AC139530.1-201ENST00000575312 1977 ntBASIC20.71■□□□□ 0.91
AMBRA1Q9C0C7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.71■□□□□ 0.91
AMBRA1Q9C0C7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AMBRA1Q9C0C7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.71■□□□□ 0.91
AMBRA1Q9C0C7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
AMBRA1Q9C0C7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
AMBRA1Q9C0C7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AMBRA1Q9C0C7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
AMBRA1Q9C0C7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
AMBRA1Q9C0C7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
AMBRA1Q9C0C7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
AMBRA1Q9C0C7 THA1P-201ENST00000590384 1145 ntBASIC20.7■□□□□ 0.9
AMBRA1Q9C0C7 AL031848.2-201ENST00000607670 837 ntBASIC20.7■□□□□ 0.9
AMBRA1Q9C0C7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AMBRA1Q9C0C7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.69■□□□□ 0.9
AMBRA1Q9C0C7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AMBRA1Q9C0C7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.69■□□□□ 0.9
AMBRA1Q9C0C7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AMBRA1Q9C0C7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
AMBRA1Q9C0C7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AMBRA1Q9C0C7 AC019069.1-201ENST00000610008 1333 ntBASIC20.69■□□□□ 0.9
AMBRA1Q9C0C7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
AMBRA1Q9C0C7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.69■□□□□ 0.9
AMBRA1Q9C0C7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms