Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV9Q99603 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV9Q99603 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV9Q99603 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV9Q99603 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV9Q99603 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV9Q99603 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV9Q99603 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.32■□□□□ 0.36
TRGV9Q99603 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.32■□□□□ 0.36
TRGV9Q99603 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV9Q99603 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.32■□□□□ 0.36
TRGV9Q99603 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV9Q99603 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV9Q99603 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV9Q99603 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRGV9Q99603 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV9Q99603 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV9Q99603 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.31■□□□□ 0.36
TRGV9Q99603 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.31■□□□□ 0.36
TRGV9Q99603 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRGV9Q99603 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV9Q99603 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
TRGV9Q99603 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRGV9Q99603 AC092053.2-201ENST00000640557 1818 ntBASIC17.31■□□□□ 0.36
TRGV9Q99603 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRGV9Q99603 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.31■□□□□ 0.36
TRGV9Q99603 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV9Q99603 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV9Q99603 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV9Q99603 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV9Q99603 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV9Q99603 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV9Q99603 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRGV9Q99603 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
TRGV9Q99603 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV9Q99603 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
TRGV9Q99603 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRGV9Q99603 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV9Q99603 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV9Q99603 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV9Q99603 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV9Q99603 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV9Q99603 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV9Q99603 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV9Q99603 AC139530.1-201ENST00000575312 1977 ntBASIC17.3■□□□□ 0.36
TRGV9Q99603 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV9Q99603 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV9Q99603 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV9Q99603 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV9Q99603 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.3■□□□□ 0.36
TRGV9Q99603 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.3■□□□□ 0.36
TRGV9Q99603 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.3■□□□□ 0.36
TRGV9Q99603 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV9Q99603 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
TRGV9Q99603 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV9Q99603 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV9Q99603 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV9Q99603 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV9Q99603 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRGV9Q99603 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.29■□□□□ 0.36
TRGV9Q99603 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV9Q99603 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV9Q99603 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV9Q99603 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRGV9Q99603 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.29■□□□□ 0.36
TRGV9Q99603 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV9Q99603 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV9Q99603 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV9Q99603 AC137630.3-201ENST00000607245 391 ntBASIC17.29■□□□□ 0.36
TRGV9Q99603 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV9Q99603 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.29■□□□□ 0.36
TRGV9Q99603 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRGV9Q99603 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV9Q99603 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV9Q99603 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV9Q99603 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.29■□□□□ 0.36
TRGV9Q99603 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV9Q99603 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRGV9Q99603 FP325331.1-202ENST00000623531 1380 ntBASIC17.28■□□□□ 0.36
TRGV9Q99603 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV9Q99603 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRGV9Q99603 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV9Q99603 YBX1P4-201ENST00000392794 808 ntBASIC17.28■□□□□ 0.36
TRGV9Q99603 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.28■□□□□ 0.36
TRGV9Q99603 AC012354.3-201ENST00000623734 483 ntBASIC17.28■□□□□ 0.36
TRGV9Q99603 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV9Q99603 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV9Q99603 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.28■□□□□ 0.36
TRGV9Q99603 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV9Q99603 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV9Q99603 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRGV9Q99603 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRGV9Q99603 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
TRGV9Q99603 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRGV9Q99603 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRGV9Q99603 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRGV9Q99603 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRGV9Q99603 LINC01529-204ENST00000636474 1715 ntBASIC17.27■□□□□ 0.36
TRGV9Q99603 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
TRGV9Q99603 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms