Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.97■□□□□ 0.79
PTP4A1Q93096 RARRES2P1-201ENST00000474487 481 ntBASIC19.97■□□□□ 0.79
PTP4A1Q93096 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTP4A1Q93096 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTP4A1Q93096 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PTP4A1Q93096 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTP4A1Q93096 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTP4A1Q93096 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTP4A1Q93096 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.96■□□□□ 0.79
PTP4A1Q93096 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTP4A1Q93096 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTP4A1Q93096 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTP4A1Q93096 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTP4A1Q93096 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTP4A1Q93096 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.96■□□□□ 0.79
PTP4A1Q93096 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTP4A1Q93096 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PTP4A1Q93096 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTP4A1Q93096 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTP4A1Q93096 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTP4A1Q93096 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTP4A1Q93096 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTP4A1Q93096 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.95■□□□□ 0.78
PTP4A1Q93096 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.95■□□□□ 0.78
PTP4A1Q93096 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.95■□□□□ 0.78
PTP4A1Q93096 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTP4A1Q93096 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.95■□□□□ 0.78
PTP4A1Q93096 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTP4A1Q93096 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PTP4A1Q93096 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTP4A1Q93096 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTP4A1Q93096 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTP4A1Q93096 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTP4A1Q93096 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.94■□□□□ 0.78
PTP4A1Q93096 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTP4A1Q93096 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTP4A1Q93096 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.94■□□□□ 0.78
PTP4A1Q93096 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PTP4A1Q93096 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
PTP4A1Q93096 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PTP4A1Q93096 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.93■□□□□ 0.78
PTP4A1Q93096 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PTP4A1Q93096 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTP4A1Q93096 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTP4A1Q93096 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTP4A1Q93096 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTP4A1Q93096 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTP4A1Q93096 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTP4A1Q93096 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTP4A1Q93096 AC139530.1-201ENST00000575312 1977 ntBASIC19.93■□□□□ 0.78
PTP4A1Q93096 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTP4A1Q93096 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PTP4A1Q93096 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.93■□□□□ 0.78
PTP4A1Q93096 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.93■□□□□ 0.78
PTP4A1Q93096 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTP4A1Q93096 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTP4A1Q93096 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PTP4A1Q93096 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.92■□□□□ 0.78
PTP4A1Q93096 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTP4A1Q93096 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTP4A1Q93096 AC144652.1-201ENST00000609974 1624 ntBASIC19.92■□□□□ 0.78
PTP4A1Q93096 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.92■□□□□ 0.78
PTP4A1Q93096 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTP4A1Q93096 SNX5-217ENST00000606557 1087 ntBASIC19.92■□□□□ 0.78
PTP4A1Q93096 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
PTP4A1Q93096 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTP4A1Q93096 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTP4A1Q93096 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTP4A1Q93096 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTP4A1Q93096 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.91■□□□□ 0.78
PTP4A1Q93096 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTP4A1Q93096 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTP4A1Q93096 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
PTP4A1Q93096 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTP4A1Q93096 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTP4A1Q93096 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
PTP4A1Q93096 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTP4A1Q93096 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTP4A1Q93096 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PTP4A1Q93096 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PTP4A1Q93096 AC087742.1-201ENST00000575880 1738 ntBASIC19.9■□□□□ 0.78
PTP4A1Q93096 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
PTP4A1Q93096 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTP4A1Q93096 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTP4A1Q93096 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.9■□□□□ 0.78
PTP4A1Q93096 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PTP4A1Q93096 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTP4A1Q93096 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTP4A1Q93096 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.9■□□□□ 0.78
PTP4A1Q93096 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.9■□□□□ 0.78
PTP4A1Q93096 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PTP4A1Q93096 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.9■□□□□ 0.78
PTP4A1Q93096 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.9■□□□□ 0.78
PTP4A1Q93096 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PTP4A1Q93096 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.9■□□□□ 0.78
PTP4A1Q93096 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.9■□□□□ 0.78
PTP4A1Q93096 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTP4A1Q93096 AC080038.3-201ENST00000623346 1952 ntBASIC19.9■□□□□ 0.78
PTP4A1Q93096 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTP4A1Q93096 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms