Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
AP3S1Q92572 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3S1Q92572 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.57■□□□□ 0.72
AP3S1Q92572 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.57■□□□□ 0.72
AP3S1Q92572 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.57■□□□□ 0.72
AP3S1Q92572 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3S1Q92572 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
AP3S1Q92572 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.57■□□□□ 0.72
AP3S1Q92572 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
AP3S1Q92572 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3S1Q92572 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
AP3S1Q92572 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3S1Q92572 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3S1Q92572 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3S1Q92572 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3S1Q92572 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3S1Q92572 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
AP3S1Q92572 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3S1Q92572 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.56■□□□□ 0.72
AP3S1Q92572 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3S1Q92572 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AP3S1Q92572 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3S1Q92572 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.56■□□□□ 0.72
AP3S1Q92572 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.56■□□□□ 0.72
AP3S1Q92572 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3S1Q92572 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.55■□□□□ 0.72
AP3S1Q92572 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3S1Q92572 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.55■□□□□ 0.72
AP3S1Q92572 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3S1Q92572 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AP3S1Q92572 RP9P-202ENST00000450133 1212 ntBASIC19.55■□□□□ 0.72
AP3S1Q92572 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.55■□□□□ 0.72
AP3S1Q92572 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3S1Q92572 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3S1Q92572 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
AP3S1Q92572 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3S1Q92572 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.54■□□□□ 0.72
AP3S1Q92572 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3S1Q92572 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3S1Q92572 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
AP3S1Q92572 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3S1Q92572 AC079630.1-202ENST00000618127 1840 ntBASIC19.54■□□□□ 0.72
AP3S1Q92572 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.54■□□□□ 0.72
AP3S1Q92572 ALDH1A3-203ENST00000557963 1670 ntBASIC19.54■□□□□ 0.72
AP3S1Q92572 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3S1Q92572 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3S1Q92572 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
AP3S1Q92572 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3S1Q92572 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AP3S1Q92572 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3S1Q92572 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3S1Q92572 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.54■□□□□ 0.72
AP3S1Q92572 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3S1Q92572 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.54■□□□□ 0.72
AP3S1Q92572 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP3S1Q92572 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
AP3S1Q92572 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.53■□□□□ 0.72
AP3S1Q92572 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.53■□□□□ 0.72
AP3S1Q92572 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
AP3S1Q92572 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.53■□□□□ 0.72
AP3S1Q92572 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP3S1Q92572 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP3S1Q92572 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP3S1Q92572 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
AP3S1Q92572 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP3S1Q92572 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
AP3S1Q92572 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
AP3S1Q92572 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP3S1Q92572 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP3S1Q92572 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.52■□□□□ 0.72
AP3S1Q92572 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
AP3S1Q92572 AC080038.3-201ENST00000623346 1952 ntBASIC19.52■□□□□ 0.72
AP3S1Q92572 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
AP3S1Q92572 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
AP3S1Q92572 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
AP3S1Q92572 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
AP3S1Q92572 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP3S1Q92572 AC073130.3-201ENST00000624389 2278 ntBASIC19.51■□□□□ 0.71
AP3S1Q92572 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
AP3S1Q92572 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP3S1Q92572 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.51■□□□□ 0.71
AP3S1Q92572 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
AP3S1Q92572 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
AP3S1Q92572 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
AP3S1Q92572 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
AP3S1Q92572 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
AP3S1Q92572 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP3S1Q92572 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
AP3S1Q92572 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.51■□□□□ 0.71
AP3S1Q92572 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
AP3S1Q92572 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
AP3S1Q92572 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
AP3S1Q92572 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AP3S1Q92572 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.51■□□□□ 0.71
AP3S1Q92572 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
AP3S1Q92572 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3S1Q92572 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.5■□□□□ 0.71
AP3S1Q92572 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
AP3S1Q92572 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3S1Q92572 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms