Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.32■■□□□ 1.32
RNF139Q8WU17 AC011298.3-201ENST00000615796 283 ntBASIC23.32■■□□□ 1.32
RNF139Q8WU17 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF139Q8WU17 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.32■■□□□ 1.32
RNF139Q8WU17 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF139Q8WU17 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF139Q8WU17 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RNF139Q8WU17 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.32■■□□□ 1.32
RNF139Q8WU17 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF139Q8WU17 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF139Q8WU17 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.31■■□□□ 1.32
RNF139Q8WU17 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.31■■□□□ 1.32
RNF139Q8WU17 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF139Q8WU17 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
RNF139Q8WU17 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF139Q8WU17 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.31■■□□□ 1.32
RNF139Q8WU17 AC133561.4-201ENST00000566112 224 ntBASIC23.31■■□□□ 1.32
RNF139Q8WU17 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.31■■□□□ 1.32
RNF139Q8WU17 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF139Q8WU17 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RNF139Q8WU17 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF139Q8WU17 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.3■■□□□ 1.32
RNF139Q8WU17 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.3■■□□□ 1.32
RNF139Q8WU17 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RNF139Q8WU17 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF139Q8WU17 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RNF139Q8WU17 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF139Q8WU17 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.3■■□□□ 1.32
RNF139Q8WU17 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.3■■□□□ 1.32
RNF139Q8WU17 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
RNF139Q8WU17 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF139Q8WU17 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.29■■□□□ 1.32
RNF139Q8WU17 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF139Q8WU17 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF139Q8WU17 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF139Q8WU17 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF139Q8WU17 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.29■■□□□ 1.32
RNF139Q8WU17 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.29■■□□□ 1.32
RNF139Q8WU17 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF139Q8WU17 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF139Q8WU17 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.29■■□□□ 1.32
RNF139Q8WU17 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.29■■□□□ 1.32
RNF139Q8WU17 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.29■■□□□ 1.32
RNF139Q8WU17 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF139Q8WU17 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.29■■□□□ 1.32
RNF139Q8WU17 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF139Q8WU17 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.29■■□□□ 1.32
RNF139Q8WU17 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
RNF139Q8WU17 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RNF139Q8WU17 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.28■■□□□ 1.32
RNF139Q8WU17 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.28■■□□□ 1.32
RNF139Q8WU17 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.28■■□□□ 1.32
RNF139Q8WU17 MIR4767-201ENST00000582827 78 ntBASIC23.28■■□□□ 1.32
RNF139Q8WU17 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
RNF139Q8WU17 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF139Q8WU17 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF139Q8WU17 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.28■■□□□ 1.32
RNF139Q8WU17 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF139Q8WU17 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
RNF139Q8WU17 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF139Q8WU17 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.27■■□□□ 1.32
RNF139Q8WU17 AC005837.3-201ENST00000612163 286 ntBASIC23.27■■□□□ 1.32
RNF139Q8WU17 AC136469.2-201ENST00000623944 1028 ntBASIC23.27■■□□□ 1.32
RNF139Q8WU17 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.27■■□□□ 1.32
RNF139Q8WU17 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.27■■□□□ 1.32
RNF139Q8WU17 AL353803.4-201ENST00000565882 1934 ntBASIC23.27■■□□□ 1.32
RNF139Q8WU17 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.27■■□□□ 1.32
RNF139Q8WU17 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF139Q8WU17 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.31
RNF139Q8WU17 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF139Q8WU17 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF139Q8WU17 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.26■■□□□ 1.31
RNF139Q8WU17 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF139Q8WU17 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.26■■□□□ 1.31
RNF139Q8WU17 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF139Q8WU17 EDA-201ENST00000338901 1233 ntBASIC23.26■■□□□ 1.31
RNF139Q8WU17 AL499627.2-201ENST00000606283 725 ntBASIC23.26■■□□□ 1.31
RNF139Q8WU17 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RNF139Q8WU17 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RNF139Q8WU17 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RNF139Q8WU17 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
RNF139Q8WU17 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RNF139Q8WU17 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF139Q8WU17 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RNF139Q8WU17 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF139Q8WU17 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RNF139Q8WU17 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF139Q8WU17 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RNF139Q8WU17 AL355001.2-201ENST00000620617 1191 ntBASIC23.25■■□□□ 1.31
RNF139Q8WU17 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RNF139Q8WU17 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF139Q8WU17 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.25■■□□□ 1.31
RNF139Q8WU17 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF139Q8WU17 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.25■■□□□ 1.31
RNF139Q8WU17 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF139Q8WU17 AC133637.1-201ENST00000624115 1537 ntBASIC23.24■■□□□ 1.31
RNF139Q8WU17 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.24■■□□□ 1.31
RNF139Q8WU17 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF139Q8WU17 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF139Q8WU17 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms