Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNIH3Q8TBE1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNIH3Q8TBE1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNIH3Q8TBE1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNIH3Q8TBE1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNIH3Q8TBE1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CNIH3Q8TBE1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNIH3Q8TBE1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.3■□□□□ 0.84
CNIH3Q8TBE1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.3■□□□□ 0.84
CNIH3Q8TBE1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNIH3Q8TBE1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.3■□□□□ 0.84
CNIH3Q8TBE1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNIH3Q8TBE1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNIH3Q8TBE1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.3■□□□□ 0.84
CNIH3Q8TBE1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNIH3Q8TBE1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNIH3Q8TBE1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNIH3Q8TBE1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CNIH3Q8TBE1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CNIH3Q8TBE1 MIR639-201ENST00000384974 98 ntBASIC20.29■□□□□ 0.84
CNIH3Q8TBE1 AL592295.1-201ENST00000400984 884 ntBASIC20.29■□□□□ 0.84
CNIH3Q8TBE1 RPS2P7-201ENST00000447334 885 ntBASIC20.29■□□□□ 0.84
CNIH3Q8TBE1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.29■□□□□ 0.84
CNIH3Q8TBE1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNIH3Q8TBE1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.29■□□□□ 0.84
CNIH3Q8TBE1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CNIH3Q8TBE1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNIH3Q8TBE1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNIH3Q8TBE1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNIH3Q8TBE1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CNIH3Q8TBE1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.29■□□□□ 0.84
CNIH3Q8TBE1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNIH3Q8TBE1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNIH3Q8TBE1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNIH3Q8TBE1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.28■□□□□ 0.84
CNIH3Q8TBE1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNIH3Q8TBE1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNIH3Q8TBE1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNIH3Q8TBE1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNIH3Q8TBE1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CNIH3Q8TBE1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.28■□□□□ 0.84
CNIH3Q8TBE1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CNIH3Q8TBE1 FAM99A-202ENST00000538190 1989 ntBASIC20.28■□□□□ 0.84
CNIH3Q8TBE1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.27■□□□□ 0.84
CNIH3Q8TBE1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CNIH3Q8TBE1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CNIH3Q8TBE1 AC073130.3-201ENST00000624389 2278 ntBASIC20.27■□□□□ 0.84
CNIH3Q8TBE1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNIH3Q8TBE1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.27■□□□□ 0.84
CNIH3Q8TBE1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNIH3Q8TBE1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNIH3Q8TBE1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CNIH3Q8TBE1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CNIH3Q8TBE1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CNIH3Q8TBE1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CNIH3Q8TBE1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CNIH3Q8TBE1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.26■□□□□ 0.83
CNIH3Q8TBE1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CNIH3Q8TBE1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNIH3Q8TBE1 AL353803.4-201ENST00000565882 1934 ntBASIC20.26■□□□□ 0.83
CNIH3Q8TBE1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNIH3Q8TBE1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.26■□□□□ 0.83
CNIH3Q8TBE1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNIH3Q8TBE1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNIH3Q8TBE1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNIH3Q8TBE1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNIH3Q8TBE1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNIH3Q8TBE1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.26■□□□□ 0.83
CNIH3Q8TBE1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNIH3Q8TBE1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.26■□□□□ 0.83
CNIH3Q8TBE1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.25■□□□□ 0.83
CNIH3Q8TBE1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNIH3Q8TBE1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
CNIH3Q8TBE1 AC087742.1-201ENST00000575880 1738 ntBASIC20.25■□□□□ 0.83
CNIH3Q8TBE1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNIH3Q8TBE1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNIH3Q8TBE1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CNIH3Q8TBE1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNIH3Q8TBE1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CNIH3Q8TBE1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.25■□□□□ 0.83
CNIH3Q8TBE1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNIH3Q8TBE1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.25■□□□□ 0.83
CNIH3Q8TBE1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNIH3Q8TBE1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNIH3Q8TBE1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CNIH3Q8TBE1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNIH3Q8TBE1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.25■□□□□ 0.83
CNIH3Q8TBE1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNIH3Q8TBE1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CNIH3Q8TBE1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNIH3Q8TBE1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNIH3Q8TBE1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNIH3Q8TBE1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.24■□□□□ 0.83
CNIH3Q8TBE1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNIH3Q8TBE1 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.24■□□□□ 0.83
CNIH3Q8TBE1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNIH3Q8TBE1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.24■□□□□ 0.83
CNIH3Q8TBE1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNIH3Q8TBE1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNIH3Q8TBE1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 323.7 ms