Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
NKX2-3Q8TAU0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
NKX2-3Q8TAU0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
NKX2-3Q8TAU0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NKX2-3Q8TAU0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
NKX2-3Q8TAU0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC26.45■■□□□ 1.83
NKX2-3Q8TAU0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
NKX2-3Q8TAU0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.45■■□□□ 1.82
NKX2-3Q8TAU0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
NKX2-3Q8TAU0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
NKX2-3Q8TAU0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.45■■□□□ 1.82
NKX2-3Q8TAU0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26.45■■□□□ 1.82
NKX2-3Q8TAU0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
NKX2-3Q8TAU0 AC144652.1-201ENST00000609974 1624 ntBASIC26.44■■□□□ 1.82
NKX2-3Q8TAU0 IRS3P-201ENST00000223076 1006 ntBASIC26.44■■□□□ 1.82
NKX2-3Q8TAU0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
NKX2-3Q8TAU0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
NKX2-3Q8TAU0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.43■■□□□ 1.82
NKX2-3Q8TAU0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NKX2-3Q8TAU0 SERBP1P1-201ENST00000396021 1160 ntBASIC26.43■■□□□ 1.82
NKX2-3Q8TAU0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NKX2-3Q8TAU0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
NKX2-3Q8TAU0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
NKX2-3Q8TAU0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
NKX2-3Q8TAU0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NKX2-3Q8TAU0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
NKX2-3Q8TAU0 SYT6-210ENST00000641643 1587 ntBASIC26.42■■□□□ 1.82
NKX2-3Q8TAU0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
NKX2-3Q8TAU0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
NKX2-3Q8TAU0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.42■■□□□ 1.82
NKX2-3Q8TAU0 AL353803.4-201ENST00000565882 1934 ntBASIC26.42■■□□□ 1.82
NKX2-3Q8TAU0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
NKX2-3Q8TAU0 AC027682.1-201ENST00000562846 899 ntBASIC26.42■■□□□ 1.82
NKX2-3Q8TAU0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
NKX2-3Q8TAU0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
NKX2-3Q8TAU0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
NKX2-3Q8TAU0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
NKX2-3Q8TAU0 C9orf163-202ENST00000624034 2573 ntBASIC26.42■■□□□ 1.82
NKX2-3Q8TAU0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
NKX2-3Q8TAU0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NKX2-3Q8TAU0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.41■■□□□ 1.82
NKX2-3Q8TAU0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
NKX2-3Q8TAU0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC26.41■■□□□ 1.82
NKX2-3Q8TAU0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC26.41■■□□□ 1.82
NKX2-3Q8TAU0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
NKX2-3Q8TAU0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.41■■□□□ 1.82
NKX2-3Q8TAU0 AC092068.2-201ENST00000590491 1708 ntBASIC26.41■■□□□ 1.82
NKX2-3Q8TAU0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC26.41■■□□□ 1.82
NKX2-3Q8TAU0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NKX2-3Q8TAU0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
NKX2-3Q8TAU0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
NKX2-3Q8TAU0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NKX2-3Q8TAU0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
NKX2-3Q8TAU0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
NKX2-3Q8TAU0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
NKX2-3Q8TAU0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC26.4■■□□□ 1.82
NKX2-3Q8TAU0 MIR4767-201ENST00000582827 78 ntBASIC26.4■■□□□ 1.82
NKX2-3Q8TAU0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
NKX2-3Q8TAU0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
NKX2-3Q8TAU0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.39■■□□□ 1.82
NKX2-3Q8TAU0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.39■■□□□ 1.82
NKX2-3Q8TAU0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
NKX2-3Q8TAU0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
NKX2-3Q8TAU0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.39■■□□□ 1.82
NKX2-3Q8TAU0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC26.39■■□□□ 1.82
NKX2-3Q8TAU0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
NKX2-3Q8TAU0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
NKX2-3Q8TAU0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NKX2-3Q8TAU0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC26.38■■□□□ 1.81
NKX2-3Q8TAU0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
NKX2-3Q8TAU0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
NKX2-3Q8TAU0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
NKX2-3Q8TAU0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.38■■□□□ 1.81
NKX2-3Q8TAU0 MIR3181-201ENST00000578512 73 ntBASIC26.38■■□□□ 1.81
NKX2-3Q8TAU0 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.38■■□□□ 1.81
NKX2-3Q8TAU0 AL137784.2-201ENST00000607332 1000 ntBASIC26.38■■□□□ 1.81
NKX2-3Q8TAU0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NKX2-3Q8TAU0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.38■■□□□ 1.81
NKX2-3Q8TAU0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.38■■□□□ 1.81
NKX2-3Q8TAU0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NKX2-3Q8TAU0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
NKX2-3Q8TAU0 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.37■■□□□ 1.81
NKX2-3Q8TAU0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
NKX2-3Q8TAU0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.37■■□□□ 1.81
NKX2-3Q8TAU0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NKX2-3Q8TAU0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.36■■□□□ 1.81
NKX2-3Q8TAU0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.36■■□□□ 1.81
NKX2-3Q8TAU0 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.36■■□□□ 1.81
NKX2-3Q8TAU0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC26.36■■□□□ 1.81
NKX2-3Q8TAU0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC26.36■■□□□ 1.81
NKX2-3Q8TAU0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.36■■□□□ 1.81
NKX2-3Q8TAU0 AC009086.3-201ENST00000623486 1008 ntBASIC26.36■■□□□ 1.81
NKX2-3Q8TAU0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.36■■□□□ 1.81
NKX2-3Q8TAU0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.36■■□□□ 1.81
NKX2-3Q8TAU0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
NKX2-3Q8TAU0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NKX2-3Q8TAU0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
NKX2-3Q8TAU0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
NKX2-3Q8TAU0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
NKX2-3Q8TAU0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms