Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SHCBP1Q8NEM2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SHCBP1Q8NEM2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
SHCBP1Q8NEM2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SHCBP1Q8NEM2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.49■■□□□ 1.67
SHCBP1Q8NEM2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SHCBP1Q8NEM2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
SHCBP1Q8NEM2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
SHCBP1Q8NEM2 NT5C3AP1-201ENST00000394500 1012 ntBASIC25.49■■□□□ 1.67
SHCBP1Q8NEM2 AC004911.1-201ENST00000416316 871 ntBASIC25.49■■□□□ 1.67
SHCBP1Q8NEM2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.49■■□□□ 1.67
SHCBP1Q8NEM2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SHCBP1Q8NEM2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC25.49■■□□□ 1.67
SHCBP1Q8NEM2 AC105233.4-201ENST00000642045 216 ntBASIC25.49■■□□□ 1.67
SHCBP1Q8NEM2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SHCBP1Q8NEM2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SHCBP1Q8NEM2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SHCBP1Q8NEM2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SHCBP1Q8NEM2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC25.48■■□□□ 1.67
SHCBP1Q8NEM2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SHCBP1Q8NEM2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC25.48■■□□□ 1.67
SHCBP1Q8NEM2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.48■■□□□ 1.67
SHCBP1Q8NEM2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
SHCBP1Q8NEM2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SHCBP1Q8NEM2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SHCBP1Q8NEM2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SHCBP1Q8NEM2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.47■■□□□ 1.67
SHCBP1Q8NEM2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC25.47■■□□□ 1.67
SHCBP1Q8NEM2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
SHCBP1Q8NEM2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SHCBP1Q8NEM2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SHCBP1Q8NEM2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SHCBP1Q8NEM2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.47■■□□□ 1.67
SHCBP1Q8NEM2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.47■■□□□ 1.67
SHCBP1Q8NEM2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
SHCBP1Q8NEM2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SHCBP1Q8NEM2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SHCBP1Q8NEM2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SHCBP1Q8NEM2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
SHCBP1Q8NEM2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SHCBP1Q8NEM2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.46■■□□□ 1.67
SHCBP1Q8NEM2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC25.46■■□□□ 1.67
SHCBP1Q8NEM2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
SHCBP1Q8NEM2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25.45■■□□□ 1.67
SHCBP1Q8NEM2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SHCBP1Q8NEM2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.67
SHCBP1Q8NEM2 AC138932.3-201ENST00000567634 1902 ntBASIC25.45■■□□□ 1.67
SHCBP1Q8NEM2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
SHCBP1Q8NEM2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SHCBP1Q8NEM2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.45■■□□□ 1.66
SHCBP1Q8NEM2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.45■■□□□ 1.66
SHCBP1Q8NEM2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.45■■□□□ 1.66
SHCBP1Q8NEM2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.45■■□□□ 1.66
SHCBP1Q8NEM2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC25.45■■□□□ 1.66
SHCBP1Q8NEM2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SHCBP1Q8NEM2 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.45■■□□□ 1.66
SHCBP1Q8NEM2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC25.45■■□□□ 1.66
SHCBP1Q8NEM2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SHCBP1Q8NEM2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SHCBP1Q8NEM2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SHCBP1Q8NEM2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.44■■□□□ 1.66
SHCBP1Q8NEM2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.44■■□□□ 1.66
SHCBP1Q8NEM2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC25.44■■□□□ 1.66
SHCBP1Q8NEM2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.44■■□□□ 1.66
SHCBP1Q8NEM2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.44■■□□□ 1.66
SHCBP1Q8NEM2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.44■■□□□ 1.66
SHCBP1Q8NEM2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC25.44■■□□□ 1.66
SHCBP1Q8NEM2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SHCBP1Q8NEM2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
SHCBP1Q8NEM2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SHCBP1Q8NEM2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SHCBP1Q8NEM2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SHCBP1Q8NEM2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.43■■□□□ 1.66
SHCBP1Q8NEM2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SHCBP1Q8NEM2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SHCBP1Q8NEM2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SHCBP1Q8NEM2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SHCBP1Q8NEM2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC25.43■■□□□ 1.66
SHCBP1Q8NEM2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SHCBP1Q8NEM2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.43■■□□□ 1.66
SHCBP1Q8NEM2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.43■■□□□ 1.66
SHCBP1Q8NEM2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25.43■■□□□ 1.66
SHCBP1Q8NEM2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SHCBP1Q8NEM2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.42■■□□□ 1.66
SHCBP1Q8NEM2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SHCBP1Q8NEM2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
SHCBP1Q8NEM2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.42■■□□□ 1.66
SHCBP1Q8NEM2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC25.42■■□□□ 1.66
SHCBP1Q8NEM2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SHCBP1Q8NEM2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SHCBP1Q8NEM2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SHCBP1Q8NEM2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SHCBP1Q8NEM2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC25.41■■□□□ 1.66
SHCBP1Q8NEM2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SHCBP1Q8NEM2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC25.41■■□□□ 1.66
SHCBP1Q8NEM2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
SHCBP1Q8NEM2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.41■■□□□ 1.66
SHCBP1Q8NEM2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.4■■□□□ 1.66
SHCBP1Q8NEM2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC25.4■■□□□ 1.66
SHCBP1Q8NEM2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms