Protein–RNA interactions for Protein: Q8N9Z9

LMNTD1, Lamin tail domain-containing protein 1, humanhuman

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1Q8N9Z9 pRNA.13-201ENST00000619112 90 ntBASIC21.61■■□□□ 1.05
LMNTD1Q8N9Z9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.61■■□□□ 1.05
LMNTD1Q8N9Z9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
LMNTD1Q8N9Z9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
LMNTD1Q8N9Z9 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
LMNTD1Q8N9Z9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LMNTD1Q8N9Z9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LMNTD1Q8N9Z9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LMNTD1Q8N9Z9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
LMNTD1Q8N9Z9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.6■■□□□ 1.05
LMNTD1Q8N9Z9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LMNTD1Q8N9Z9 AC092171.4-201ENST00000609130 632 ntBASIC21.6■■□□□ 1.05
LMNTD1Q8N9Z9 DUSP8P3-201ENST00000399571 1760 ntBASIC21.6■■□□□ 1.05
LMNTD1Q8N9Z9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
LMNTD1Q8N9Z9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LMNTD1Q8N9Z9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.59■■□□□ 1.05
LMNTD1Q8N9Z9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.59■■□□□ 1.05
LMNTD1Q8N9Z9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LMNTD1Q8N9Z9 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.59■■□□□ 1.05
LMNTD1Q8N9Z9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.59■■□□□ 1.05
LMNTD1Q8N9Z9 MIR3181-201ENST00000578512 73 ntBASIC21.59■■□□□ 1.05
LMNTD1Q8N9Z9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.59■■□□□ 1.05
LMNTD1Q8N9Z9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.59■■□□□ 1.05
LMNTD1Q8N9Z9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.58■■□□□ 1.05
LMNTD1Q8N9Z9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
LMNTD1Q8N9Z9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LMNTD1Q8N9Z9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LMNTD1Q8N9Z9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
LMNTD1Q8N9Z9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.58■■□□□ 1.05
LMNTD1Q8N9Z9 DUX4L4-201ENST00000566884 1269 ntBASIC21.58■■□□□ 1.05
LMNTD1Q8N9Z9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LMNTD1Q8N9Z9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.58■■□□□ 1.04
LMNTD1Q8N9Z9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
LMNTD1Q8N9Z9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.04
LMNTD1Q8N9Z9 SYT6-210ENST00000641643 1587 ntBASIC21.57■■□□□ 1.04
LMNTD1Q8N9Z9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.57■■□□□ 1.04
LMNTD1Q8N9Z9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
LMNTD1Q8N9Z9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
LMNTD1Q8N9Z9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.57■■□□□ 1.04
LMNTD1Q8N9Z9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LMNTD1Q8N9Z9 AC024257.2-201ENST00000549699 147 ntBASIC21.57■■□□□ 1.04
LMNTD1Q8N9Z9 DUX4L19-201ENST00000557448 1267 ntBASIC21.57■■□□□ 1.04
LMNTD1Q8N9Z9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LMNTD1Q8N9Z9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.56■■□□□ 1.04
LMNTD1Q8N9Z9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
LMNTD1Q8N9Z9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.56■■□□□ 1.04
LMNTD1Q8N9Z9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LMNTD1Q8N9Z9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.56■■□□□ 1.04
LMNTD1Q8N9Z9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
LMNTD1Q8N9Z9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.56■■□□□ 1.04
LMNTD1Q8N9Z9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LMNTD1Q8N9Z9 AL136162.1-201ENST00000607711 1078 ntBASIC21.56■■□□□ 1.04
LMNTD1Q8N9Z9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LMNTD1Q8N9Z9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
LMNTD1Q8N9Z9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LMNTD1Q8N9Z9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LMNTD1Q8N9Z9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LMNTD1Q8N9Z9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.55■■□□□ 1.04
LMNTD1Q8N9Z9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LMNTD1Q8N9Z9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
LMNTD1Q8N9Z9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.55■■□□□ 1.04
LMNTD1Q8N9Z9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
LMNTD1Q8N9Z9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.55■■□□□ 1.04
LMNTD1Q8N9Z9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
LMNTD1Q8N9Z9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LMNTD1Q8N9Z9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
LMNTD1Q8N9Z9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LMNTD1Q8N9Z9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LMNTD1Q8N9Z9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LMNTD1Q8N9Z9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.54■■□□□ 1.04
LMNTD1Q8N9Z9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LMNTD1Q8N9Z9 PBX2P1-201ENST00000493219 1291 ntBASIC21.54■■□□□ 1.04
LMNTD1Q8N9Z9 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.54■■□□□ 1.04
LMNTD1Q8N9Z9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LMNTD1Q8N9Z9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
LMNTD1Q8N9Z9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LMNTD1Q8N9Z9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LMNTD1Q8N9Z9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LMNTD1Q8N9Z9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LMNTD1Q8N9Z9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
LMNTD1Q8N9Z9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LMNTD1Q8N9Z9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LMNTD1Q8N9Z9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LMNTD1Q8N9Z9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LMNTD1Q8N9Z9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
LMNTD1Q8N9Z9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LMNTD1Q8N9Z9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
LMNTD1Q8N9Z9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LMNTD1Q8N9Z9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.53■■□□□ 1.04
LMNTD1Q8N9Z9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.53■■□□□ 1.04
LMNTD1Q8N9Z9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
LMNTD1Q8N9Z9 AC004687.1-201ENST00000579003 1625 ntBASIC21.53■■□□□ 1.04
LMNTD1Q8N9Z9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LMNTD1Q8N9Z9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LMNTD1Q8N9Z9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LMNTD1Q8N9Z9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.52■■□□□ 1.04
LMNTD1Q8N9Z9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
LMNTD1Q8N9Z9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.52■■□□□ 1.04
LMNTD1Q8N9Z9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.52■■□□□ 1.03
LMNTD1Q8N9Z9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms