Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SYNPOQ8N3V7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SYNPOQ8N3V7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SYNPOQ8N3V7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.7■■□□□ 1.22
SYNPOQ8N3V7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.7■■□□□ 1.22
SYNPOQ8N3V7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SYNPOQ8N3V7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.7■■□□□ 1.22
SYNPOQ8N3V7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
SYNPOQ8N3V7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SYNPOQ8N3V7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SYNPOQ8N3V7 AC142381.3-201ENST00000568208 1670 ntBASIC22.7■■□□□ 1.22
SYNPOQ8N3V7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
SYNPOQ8N3V7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.7■■□□□ 1.22
SYNPOQ8N3V7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SYNPOQ8N3V7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.69■■□□□ 1.22
SYNPOQ8N3V7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SYNPOQ8N3V7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.69■■□□□ 1.22
SYNPOQ8N3V7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SYNPOQ8N3V7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.69■■□□□ 1.22
SYNPOQ8N3V7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SYNPOQ8N3V7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SYNPOQ8N3V7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.69■■□□□ 1.22
SYNPOQ8N3V7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
SYNPOQ8N3V7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SYNPOQ8N3V7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.69■■□□□ 1.22
SYNPOQ8N3V7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.69■■□□□ 1.22
SYNPOQ8N3V7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
SYNPOQ8N3V7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
SYNPOQ8N3V7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
SYNPOQ8N3V7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.69■■□□□ 1.22
SYNPOQ8N3V7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SYNPOQ8N3V7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SYNPOQ8N3V7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SYNPOQ8N3V7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SYNPOQ8N3V7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SYNPOQ8N3V7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SYNPOQ8N3V7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.68■■□□□ 1.22
SYNPOQ8N3V7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
SYNPOQ8N3V7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.68■■□□□ 1.22
SYNPOQ8N3V7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SYNPOQ8N3V7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SYNPOQ8N3V7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SYNPOQ8N3V7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SYNPOQ8N3V7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SYNPOQ8N3V7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
SYNPOQ8N3V7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
SYNPOQ8N3V7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.67■■□□□ 1.22
SYNPOQ8N3V7 AC010525.1-201ENST00000585559 441 ntBASIC22.67■■□□□ 1.22
SYNPOQ8N3V7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
SYNPOQ8N3V7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.67■■□□□ 1.22
SYNPOQ8N3V7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SYNPOQ8N3V7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SYNPOQ8N3V7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SYNPOQ8N3V7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.67■■□□□ 1.22
SYNPOQ8N3V7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
SYNPOQ8N3V7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SYNPOQ8N3V7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.66■■□□□ 1.22
SYNPOQ8N3V7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SYNPOQ8N3V7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.66■■□□□ 1.22
SYNPOQ8N3V7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SYNPOQ8N3V7 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.66■■□□□ 1.22
SYNPOQ8N3V7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SYNPOQ8N3V7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.65■■□□□ 1.22
SYNPOQ8N3V7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SYNPOQ8N3V7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SYNPOQ8N3V7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SYNPOQ8N3V7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.65■■□□□ 1.22
SYNPOQ8N3V7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.65■■□□□ 1.22
SYNPOQ8N3V7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
SYNPOQ8N3V7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SYNPOQ8N3V7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
SYNPOQ8N3V7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.65■■□□□ 1.22
SYNPOQ8N3V7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SYNPOQ8N3V7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
SYNPOQ8N3V7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
SYNPOQ8N3V7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
SYNPOQ8N3V7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SYNPOQ8N3V7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.64■■□□□ 1.21
SYNPOQ8N3V7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.64■■□□□ 1.21
SYNPOQ8N3V7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
SYNPOQ8N3V7 AC105233.4-201ENST00000642045 216 ntBASIC22.64■■□□□ 1.21
SYNPOQ8N3V7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.64■■□□□ 1.21
SYNPOQ8N3V7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SYNPOQ8N3V7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
SYNPOQ8N3V7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYNPOQ8N3V7 AC022211.4-201ENST00000625094 2161 ntBASIC22.63■■□□□ 1.21
SYNPOQ8N3V7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.63■■□□□ 1.21
SYNPOQ8N3V7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYNPOQ8N3V7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SYNPOQ8N3V7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
SYNPOQ8N3V7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.63■■□□□ 1.21
SYNPOQ8N3V7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SYNPOQ8N3V7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYNPOQ8N3V7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.63■■□□□ 1.21
SYNPOQ8N3V7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYNPOQ8N3V7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYNPOQ8N3V7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SYNPOQ8N3V7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SYNPOQ8N3V7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.62■■□□□ 1.21
SYNPOQ8N3V7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms