Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24.79■■□□□ 1.56
DHX40Q8IX18 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
DHX40Q8IX18 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
DHX40Q8IX18 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
DHX40Q8IX18 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.78■■□□□ 1.56
DHX40Q8IX18 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.78■■□□□ 1.56
DHX40Q8IX18 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
DHX40Q8IX18 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
DHX40Q8IX18 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
DHX40Q8IX18 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
DHX40Q8IX18 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
DHX40Q8IX18 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
DHX40Q8IX18 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC24.77■■□□□ 1.56
DHX40Q8IX18 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
DHX40Q8IX18 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.77■■□□□ 1.56
DHX40Q8IX18 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
DHX40Q8IX18 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
DHX40Q8IX18 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
DHX40Q8IX18 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
DHX40Q8IX18 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC24.76■■□□□ 1.55
DHX40Q8IX18 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
DHX40Q8IX18 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
DHX40Q8IX18 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.76■■□□□ 1.55
DHX40Q8IX18 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
DHX40Q8IX18 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.76■■□□□ 1.55
DHX40Q8IX18 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
DHX40Q8IX18 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
DHX40Q8IX18 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
DHX40Q8IX18 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
DHX40Q8IX18 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
DHX40Q8IX18 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
DHX40Q8IX18 MIR4281-201ENST00000580852 62 ntBASIC24.75■■□□□ 1.55
DHX40Q8IX18 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.75■■□□□ 1.55
DHX40Q8IX18 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
DHX40Q8IX18 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.75■■□□□ 1.55
DHX40Q8IX18 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
DHX40Q8IX18 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.74■■□□□ 1.55
DHX40Q8IX18 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
DHX40Q8IX18 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC24.74■■□□□ 1.55
DHX40Q8IX18 BHLHE23-202ENST00000612929 1109 ntBASIC24.74■■□□□ 1.55
DHX40Q8IX18 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
DHX40Q8IX18 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
DHX40Q8IX18 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.74■■□□□ 1.55
DHX40Q8IX18 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC24.74■■□□□ 1.55
DHX40Q8IX18 FBXW4P1-201ENST00000426721 2239 ntBASIC24.74■■□□□ 1.55
DHX40Q8IX18 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
DHX40Q8IX18 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
DHX40Q8IX18 RARRES2P1-201ENST00000474487 481 ntBASIC24.73■■□□□ 1.55
DHX40Q8IX18 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC24.73■■□□□ 1.55
DHX40Q8IX18 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC24.73■■□□□ 1.55
DHX40Q8IX18 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
DHX40Q8IX18 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
DHX40Q8IX18 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
DHX40Q8IX18 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.72■■□□□ 1.55
DHX40Q8IX18 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
DHX40Q8IX18 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
DHX40Q8IX18 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.72■■□□□ 1.55
DHX40Q8IX18 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
DHX40Q8IX18 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
DHX40Q8IX18 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
DHX40Q8IX18 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
DHX40Q8IX18 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
DHX40Q8IX18 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.72■■□□□ 1.55
DHX40Q8IX18 AL024507.2-201ENST00000606070 2574 ntBASIC24.71■■□□□ 1.55
DHX40Q8IX18 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
DHX40Q8IX18 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
DHX40Q8IX18 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
DHX40Q8IX18 AC139795.1-202ENST00000500444 432 ntBASIC24.71■■□□□ 1.55
DHX40Q8IX18 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
DHX40Q8IX18 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.55
DHX40Q8IX18 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.55
DHX40Q8IX18 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
DHX40Q8IX18 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
DHX40Q8IX18 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
DHX40Q8IX18 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
DHX40Q8IX18 THA1P-201ENST00000590384 1145 ntBASIC24.7■■□□□ 1.54
DHX40Q8IX18 PVT1_1.1-201ENST00000615125 194 ntBASIC24.7■■□□□ 1.54
DHX40Q8IX18 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
DHX40Q8IX18 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC24.7■■□□□ 1.54
DHX40Q8IX18 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
DHX40Q8IX18 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
DHX40Q8IX18 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
DHX40Q8IX18 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
DHX40Q8IX18 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
DHX40Q8IX18 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
DHX40Q8IX18 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
DHX40Q8IX18 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC24.69■■□□□ 1.54
DHX40Q8IX18 KRT18P24-201ENST00000344739 1156 ntBASIC24.69■■□□□ 1.54
DHX40Q8IX18 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
DHX40Q8IX18 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
DHX40Q8IX18 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
DHX40Q8IX18 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
DHX40Q8IX18 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
DHX40Q8IX18 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.68■■□□□ 1.54
DHX40Q8IX18 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
DHX40Q8IX18 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
DHX40Q8IX18 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
DHX40Q8IX18 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
DHX40Q8IX18 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
DHX40Q8IX18 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms