Protein–RNA interactions for Protein: Q8IUX4

APOBEC3F, DNA dC->dU-editing enzyme APOBEC-3F, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3FQ8IUX4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
APOBEC3FQ8IUX4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.52■■□□□ 1.84
APOBEC3FQ8IUX4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.52■■□□□ 1.84
APOBEC3FQ8IUX4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
APOBEC3FQ8IUX4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
APOBEC3FQ8IUX4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.52■■□□□ 1.84
APOBEC3FQ8IUX4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.52■■□□□ 1.84
APOBEC3FQ8IUX4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC26.52■■□□□ 1.84
APOBEC3FQ8IUX4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
APOBEC3FQ8IUX4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC26.52■■□□□ 1.84
APOBEC3FQ8IUX4 LINC01529-204ENST00000636474 1715 ntBASIC26.51■■□□□ 1.83
APOBEC3FQ8IUX4 AC144652.1-201ENST00000609974 1624 ntBASIC26.51■■□□□ 1.83
APOBEC3FQ8IUX4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
APOBEC3FQ8IUX4 GAS2L1P2-201ENST00000436355 1356 ntBASIC26.51■■□□□ 1.83
APOBEC3FQ8IUX4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC26.51■■□□□ 1.83
APOBEC3FQ8IUX4 RAP2CP1-201ENST00000605103 478 ntBASIC26.51■■□□□ 1.83
APOBEC3FQ8IUX4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC26.51■■□□□ 1.83
APOBEC3FQ8IUX4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
APOBEC3FQ8IUX4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
APOBEC3FQ8IUX4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
APOBEC3FQ8IUX4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
APOBEC3FQ8IUX4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.5■■□□□ 1.83
APOBEC3FQ8IUX4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.5■■□□□ 1.83
APOBEC3FQ8IUX4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC26.5■■□□□ 1.83
APOBEC3FQ8IUX4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC26.5■■□□□ 1.83
APOBEC3FQ8IUX4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC26.5■■□□□ 1.83
APOBEC3FQ8IUX4 TPRG1LP1-201ENST00000598702 760 ntBASIC26.5■■□□□ 1.83
APOBEC3FQ8IUX4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
APOBEC3FQ8IUX4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
APOBEC3FQ8IUX4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
APOBEC3FQ8IUX4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC26.49■■□□□ 1.83
APOBEC3FQ8IUX4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
APOBEC3FQ8IUX4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC26.49■■□□□ 1.83
APOBEC3FQ8IUX4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.49■■□□□ 1.83
APOBEC3FQ8IUX4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC26.49■■□□□ 1.83
APOBEC3FQ8IUX4 AC073111.5-205ENST00000641717 521 ntBASIC26.49■■□□□ 1.83
APOBEC3FQ8IUX4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
APOBEC3FQ8IUX4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
APOBEC3FQ8IUX4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
APOBEC3FQ8IUX4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
APOBEC3FQ8IUX4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
APOBEC3FQ8IUX4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
APOBEC3FQ8IUX4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC26.48■■□□□ 1.83
APOBEC3FQ8IUX4 CDCA4P2-201ENST00000441182 718 ntBASIC26.48■■□□□ 1.83
APOBEC3FQ8IUX4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC26.48■■□□□ 1.83
APOBEC3FQ8IUX4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.48■■□□□ 1.83
APOBEC3FQ8IUX4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC26.48■■□□□ 1.83
APOBEC3FQ8IUX4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.48■■□□□ 1.83
APOBEC3FQ8IUX4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.47■■□□□ 1.83
APOBEC3FQ8IUX4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
APOBEC3FQ8IUX4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
APOBEC3FQ8IUX4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC26.47■■□□□ 1.83
APOBEC3FQ8IUX4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
APOBEC3FQ8IUX4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
APOBEC3FQ8IUX4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
APOBEC3FQ8IUX4 AP003733.4-201ENST00000623785 1697 ntBASIC26.47■■□□□ 1.83
APOBEC3FQ8IUX4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
APOBEC3FQ8IUX4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC26.46■■□□□ 1.83
APOBEC3FQ8IUX4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.46■■□□□ 1.83
APOBEC3FQ8IUX4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC26.46■■□□□ 1.83
APOBEC3FQ8IUX4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC26.46■■□□□ 1.83
APOBEC3FQ8IUX4 DBI-210ENST00000542275 757 ntTSL 5 BASIC26.46■■□□□ 1.83
APOBEC3FQ8IUX4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC26.46■■□□□ 1.83
APOBEC3FQ8IUX4 GXYLT1P5-201ENST00000614548 1189 ntBASIC26.46■■□□□ 1.83
APOBEC3FQ8IUX4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
APOBEC3FQ8IUX4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC26.46■■□□□ 1.83
APOBEC3FQ8IUX4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
APOBEC3FQ8IUX4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.46■■□□□ 1.83
APOBEC3FQ8IUX4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.46■■□□□ 1.83
APOBEC3FQ8IUX4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
APOBEC3FQ8IUX4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
APOBEC3FQ8IUX4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
APOBEC3FQ8IUX4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
APOBEC3FQ8IUX4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.45■■□□□ 1.82
APOBEC3FQ8IUX4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
APOBEC3FQ8IUX4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC26.45■■□□□ 1.82
APOBEC3FQ8IUX4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
APOBEC3FQ8IUX4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
APOBEC3FQ8IUX4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC26.45■■□□□ 1.82
APOBEC3FQ8IUX4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
APOBEC3FQ8IUX4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
APOBEC3FQ8IUX4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
APOBEC3FQ8IUX4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
APOBEC3FQ8IUX4 COX20-201ENST00000366528 568 ntTSL 2 BASIC26.44■■□□□ 1.82
APOBEC3FQ8IUX4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
APOBEC3FQ8IUX4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC26.44■■□□□ 1.82
APOBEC3FQ8IUX4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
APOBEC3FQ8IUX4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
APOBEC3FQ8IUX4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
APOBEC3FQ8IUX4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
APOBEC3FQ8IUX4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
APOBEC3FQ8IUX4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.43■■□□□ 1.82
APOBEC3FQ8IUX4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
APOBEC3FQ8IUX4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
APOBEC3FQ8IUX4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
APOBEC3FQ8IUX4 AP004607.4-201ENST00000530158 1459 ntBASIC26.42■■□□□ 1.82
APOBEC3FQ8IUX4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
APOBEC3FQ8IUX4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
APOBEC3FQ8IUX4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
APOBEC3FQ8IUX4 AC026185.1-201ENST00000445748 174 ntBASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms