Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.33■■□□□ 1.17
CDHR3Q6ZTQ4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
CDHR3Q6ZTQ4 AC242852.2-201ENST00000615738 1807 ntBASIC22.33■■□□□ 1.16
CDHR3Q6ZTQ4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.16
CDHR3Q6ZTQ4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.33■■□□□ 1.16
CDHR3Q6ZTQ4 AC007375.3-201ENST00000600936 2314 ntBASIC22.32■■□□□ 1.16
CDHR3Q6ZTQ4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CDHR3Q6ZTQ4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.32■■□□□ 1.16
CDHR3Q6ZTQ4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CDHR3Q6ZTQ4 AC137767.1-201ENST00000602918 1920 ntBASIC22.32■■□□□ 1.16
CDHR3Q6ZTQ4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CDHR3Q6ZTQ4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.32■■□□□ 1.16
CDHR3Q6ZTQ4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDHR3Q6ZTQ4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.32■■□□□ 1.16
CDHR3Q6ZTQ4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.32■■□□□ 1.16
CDHR3Q6ZTQ4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.32■■□□□ 1.16
CDHR3Q6ZTQ4 AC131212.1-201ENST00000613771 668 ntBASIC22.32■■□□□ 1.16
CDHR3Q6ZTQ4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDHR3Q6ZTQ4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDHR3Q6ZTQ4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDHR3Q6ZTQ4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.31■■□□□ 1.16
CDHR3Q6ZTQ4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDHR3Q6ZTQ4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDHR3Q6ZTQ4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDHR3Q6ZTQ4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDHR3Q6ZTQ4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDHR3Q6ZTQ4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.31■■□□□ 1.16
CDHR3Q6ZTQ4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CDHR3Q6ZTQ4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.31■■□□□ 1.16
CDHR3Q6ZTQ4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.31■■□□□ 1.16
CDHR3Q6ZTQ4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDHR3Q6ZTQ4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.31■■□□□ 1.16
CDHR3Q6ZTQ4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.31■■□□□ 1.16
CDHR3Q6ZTQ4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDHR3Q6ZTQ4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CDHR3Q6ZTQ4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDHR3Q6ZTQ4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDHR3Q6ZTQ4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDHR3Q6ZTQ4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDHR3Q6ZTQ4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CDHR3Q6ZTQ4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CDHR3Q6ZTQ4 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.3■■□□□ 1.16
CDHR3Q6ZTQ4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CDHR3Q6ZTQ4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.3■■□□□ 1.16
CDHR3Q6ZTQ4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.3■■□□□ 1.16
CDHR3Q6ZTQ4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDHR3Q6ZTQ4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.3■■□□□ 1.16
CDHR3Q6ZTQ4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDHR3Q6ZTQ4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.29■■□□□ 1.16
CDHR3Q6ZTQ4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.29■■□□□ 1.16
CDHR3Q6ZTQ4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDHR3Q6ZTQ4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDHR3Q6ZTQ4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDHR3Q6ZTQ4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDHR3Q6ZTQ4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.29■■□□□ 1.16
CDHR3Q6ZTQ4 KRT16P3-201ENST00000439127 1283 ntBASIC22.29■■□□□ 1.16
CDHR3Q6ZTQ4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.29■■□□□ 1.16
CDHR3Q6ZTQ4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDHR3Q6ZTQ4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CDHR3Q6ZTQ4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CDHR3Q6ZTQ4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.28■■□□□ 1.16
CDHR3Q6ZTQ4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDHR3Q6ZTQ4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDHR3Q6ZTQ4 ESRRAP2-201ENST00000418437 1549 ntBASIC22.28■■□□□ 1.16
CDHR3Q6ZTQ4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDHR3Q6ZTQ4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.28■■□□□ 1.16
CDHR3Q6ZTQ4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.28■■□□□ 1.16
CDHR3Q6ZTQ4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDHR3Q6ZTQ4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.28■■□□□ 1.16
CDHR3Q6ZTQ4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
CDHR3Q6ZTQ4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.28■■□□□ 1.16
CDHR3Q6ZTQ4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDHR3Q6ZTQ4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDHR3Q6ZTQ4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDHR3Q6ZTQ4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDHR3Q6ZTQ4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDHR3Q6ZTQ4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDHR3Q6ZTQ4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDHR3Q6ZTQ4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CDHR3Q6ZTQ4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.27■■□□□ 1.16
CDHR3Q6ZTQ4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.27■■□□□ 1.16
CDHR3Q6ZTQ4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.27■■□□□ 1.16
CDHR3Q6ZTQ4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDHR3Q6ZTQ4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDHR3Q6ZTQ4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CDHR3Q6ZTQ4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDHR3Q6ZTQ4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
CDHR3Q6ZTQ4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.26■■□□□ 1.15
CDHR3Q6ZTQ4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CDHR3Q6ZTQ4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.26■■□□□ 1.15
CDHR3Q6ZTQ4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDHR3Q6ZTQ4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.26■■□□□ 1.15
CDHR3Q6ZTQ4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.26■■□□□ 1.15
CDHR3Q6ZTQ4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDHR3Q6ZTQ4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CDHR3Q6ZTQ4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.26■■□□□ 1.15
CDHR3Q6ZTQ4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDHR3Q6ZTQ4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDHR3Q6ZTQ4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDHR3Q6ZTQ4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms