Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.84■■□□□ 1.41
CTC1Q2NKJ3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CTC1Q2NKJ3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CTC1Q2NKJ3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CTC1Q2NKJ3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CTC1Q2NKJ3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CTC1Q2NKJ3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CTC1Q2NKJ3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.83■■□□□ 1.41
CTC1Q2NKJ3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.83■■□□□ 1.41
CTC1Q2NKJ3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CTC1Q2NKJ3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CTC1Q2NKJ3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CTC1Q2NKJ3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.83■■□□□ 1.4
CTC1Q2NKJ3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CTC1Q2NKJ3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CTC1Q2NKJ3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CTC1Q2NKJ3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CTC1Q2NKJ3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.82■■□□□ 1.4
CTC1Q2NKJ3 RAP2CP1-201ENST00000605103 478 ntBASIC23.82■■□□□ 1.4
CTC1Q2NKJ3 MIR6089-201ENST00000616698 64 ntBASIC23.82■■□□□ 1.4
CTC1Q2NKJ3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CTC1Q2NKJ3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.82■■□□□ 1.4
CTC1Q2NKJ3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.82■■□□□ 1.4
CTC1Q2NKJ3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CTC1Q2NKJ3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
CTC1Q2NKJ3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTC1Q2NKJ3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.81■■□□□ 1.4
CTC1Q2NKJ3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CTC1Q2NKJ3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CTC1Q2NKJ3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.81■■□□□ 1.4
CTC1Q2NKJ3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CTC1Q2NKJ3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CTC1Q2NKJ3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CTC1Q2NKJ3 AC141586.4-201ENST00000624558 1573 ntBASIC23.81■■□□□ 1.4
CTC1Q2NKJ3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTC1Q2NKJ3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.81■■□□□ 1.4
CTC1Q2NKJ3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTC1Q2NKJ3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTC1Q2NKJ3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTC1Q2NKJ3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTC1Q2NKJ3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTC1Q2NKJ3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.8■■□□□ 1.4
CTC1Q2NKJ3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
CTC1Q2NKJ3 AC080038.1-201ENST00000611274 1154 ntBASIC23.8■■□□□ 1.4
CTC1Q2NKJ3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.8■■□□□ 1.4
CTC1Q2NKJ3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTC1Q2NKJ3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTC1Q2NKJ3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CTC1Q2NKJ3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
CTC1Q2NKJ3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CTC1Q2NKJ3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CTC1Q2NKJ3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.79■■□□□ 1.4
CTC1Q2NKJ3 AC006015.1-201ENST00000429970 570 ntBASIC23.79■■□□□ 1.4
CTC1Q2NKJ3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.79■■□□□ 1.4
CTC1Q2NKJ3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CTC1Q2NKJ3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CTC1Q2NKJ3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CTC1Q2NKJ3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CTC1Q2NKJ3 SLC6A10P-202ENST00000431994 2058 ntBASIC23.79■■□□□ 1.4
CTC1Q2NKJ3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
CTC1Q2NKJ3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.78■■□□□ 1.4
CTC1Q2NKJ3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CTC1Q2NKJ3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.78■■□□□ 1.4
CTC1Q2NKJ3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.78■■□□□ 1.4
CTC1Q2NKJ3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.78■■□□□ 1.4
CTC1Q2NKJ3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.78■■□□□ 1.4
CTC1Q2NKJ3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CTC1Q2NKJ3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.78■■□□□ 1.4
CTC1Q2NKJ3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CTC1Q2NKJ3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.77■■□□□ 1.4
CTC1Q2NKJ3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTC1Q2NKJ3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.77■■□□□ 1.4
CTC1Q2NKJ3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTC1Q2NKJ3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTC1Q2NKJ3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTC1Q2NKJ3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CTC1Q2NKJ3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTC1Q2NKJ3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTC1Q2NKJ3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CTC1Q2NKJ3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CTC1Q2NKJ3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CTC1Q2NKJ3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CTC1Q2NKJ3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CTC1Q2NKJ3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CTC1Q2NKJ3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CTC1Q2NKJ3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CTC1Q2NKJ3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CTC1Q2NKJ3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.76■■□□□ 1.39
CTC1Q2NKJ3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.76■■□□□ 1.39
CTC1Q2NKJ3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.76■■□□□ 1.39
CTC1Q2NKJ3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CTC1Q2NKJ3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CTC1Q2NKJ3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CTC1Q2NKJ3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CTC1Q2NKJ3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.76■■□□□ 1.39
CTC1Q2NKJ3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.76■■□□□ 1.39
CTC1Q2NKJ3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CTC1Q2NKJ3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.75■■□□□ 1.39
CTC1Q2NKJ3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CTC1Q2NKJ3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms