Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 EFM2YBR271W 1260 nt3.61□□□□□ -1.83
VPS13Q07878 CRT10YOL063C 2874 nt3.61□□□□□ -1.83
VPS13Q07878 TEM1YML064C 738 nt3.61□□□□□ -1.83
VPS13Q07878 GDA1YEL042W 1557 nt3.61□□□□□ -1.83
VPS13Q07878 tK(UUU)DtK(UUU)D 73 nt3.61□□□□□ -1.83
VPS13Q07878 tK(UUU)G1tK(UUU)G1 73 nt3.61□□□□□ -1.83
VPS13Q07878 tK(UUU)G2tK(UUU)G2 73 nt3.61□□□□□ -1.83
VPS13Q07878 tK(UUU)KtK(UUU)K 73 nt3.61□□□□□ -1.83
VPS13Q07878 tK(UUU)LtK(UUU)L 73 nt3.61□□□□□ -1.83
VPS13Q07878 tK(UUU)OtK(UUU)O 73 nt3.61□□□□□ -1.83
VPS13Q07878 tK(UUU)PtK(UUU)P 73 nt3.61□□□□□ -1.83
VPS13Q07878 YIM1YMR152W 1098 nt3.61□□□□□ -1.83
VPS13Q07878 KCH1YJR054W 1494 nt3.6□□□□□ -1.83
VPS13Q07878 TRX3YCR083W 384 nt3.6□□□□□ -1.83
VPS13Q07878 YJR020WYJR020W 333 nt3.6□□□□□ -1.83
VPS13Q07878 PFK1YGR240C 2964 nt3.6□□□□□ -1.83
VPS13Q07878 VMS1YDR049W 1899 nt3.6□□□□□ -1.83
VPS13Q07878 DBF4YDR052C 2115 nt3.6□□□□□ -1.83
VPS13Q07878 EKI1YDR147W 1605 nt3.59□□□□□ -1.83
VPS13Q07878 YOR331CYOR331C 558 nt3.59□□□□□ -1.83
VPS13Q07878 KRE5YOR336W 4098 nt3.59□□□□□ -1.83
VPS13Q07878 YMR087WYMR087W 855 nt3.59□□□□□ -1.84
VPS13Q07878 LDB19YOR322C 2457 nt3.59□□□□□ -1.84
VPS13Q07878 YLR156WYLR156W 345 nt3.58□□□□□ -1.84
VPS13Q07878 YLR159WYLR159W 345 nt3.58□□□□□ -1.84
VPS13Q07878 YLR161WYLR161W 345 nt3.58□□□□□ -1.84
VPS13Q07878 SLA1YBL007C 3735 nt3.58□□□□□ -1.84
VPS13Q07878 HEL1YKR017C 1656 nt3.58□□□□□ -1.84
VPS13Q07878 tK(CUU)CtK(CUU)C 73 nt3.58□□□□□ -1.84
VPS13Q07878 tK(CUU)D1tK(CUU)D1 73 nt3.58□□□□□ -1.84
VPS13Q07878 tK(CUU)D2tK(CUU)D2 73 nt3.58□□□□□ -1.84
VPS13Q07878 tK(CUU)E1tK(CUU)E1 73 nt3.58□□□□□ -1.84
VPS13Q07878 tK(CUU)E2tK(CUU)E2 73 nt3.58□□□□□ -1.84
VPS13Q07878 tK(CUU)FtK(CUU)F 73 nt3.58□□□□□ -1.84
VPS13Q07878 tK(CUU)G1tK(CUU)G1 73 nt3.58□□□□□ -1.84
VPS13Q07878 tK(CUU)G2tK(CUU)G2 73 nt3.58□□□□□ -1.84
VPS13Q07878 tK(CUU)G3tK(CUU)G3 73 nt3.58□□□□□ -1.84
VPS13Q07878 tK(CUU)ItK(CUU)I 73 nt3.58□□□□□ -1.84
VPS13Q07878 tK(CUU)JtK(CUU)J 73 nt3.58□□□□□ -1.84
VPS13Q07878 tK(CUU)KtK(CUU)K 73 nt3.58□□□□□ -1.84
VPS13Q07878 tK(CUU)MtK(CUU)M 73 nt3.58□□□□□ -1.84
VPS13Q07878 tK(CUU)PtK(CUU)P 73 nt3.58□□□□□ -1.84
VPS13Q07878 YLR257WYLR257W 966 nt3.58□□□□□ -1.84
VPS13Q07878 NUP170YBL079W 4509 nt3.58□□□□□ -1.84
VPS13Q07878 RAI1YGL246C 1164 nt3.57□□□□□ -1.84
VPS13Q07878 BCD1YHR040W 1101 nt3.57□□□□□ -1.84
VPS13Q07878 snR42snR42 351 nt3.57□□□□□ -1.84
VPS13Q07878 POP4YBR257W 840 nt3.57□□□□□ -1.84
VPS13Q07878 CDC8YJR057W 651 nt3.57□□□□□ -1.84
VPS13Q07878 ATG8YBL078C 354 nt3.57□□□□□ -1.84
VPS13Q07878 NIP7YPL211W 546 nt3.57□□□□□ -1.84
VPS13Q07878 MSD1YPL104W 1977 nt3.57□□□□□ -1.84
VPS13Q07878 EMP70YLR083C 2004 nt3.57□□□□□ -1.84
VPS13Q07878 PKH1YDR490C 2301 nt3.56□□□□□ -1.84
VPS13Q07878 YHR052W-AYHR052W-A 195 nt3.56□□□□□ -1.84
VPS13Q07878 YHR054W-AYHR054W-A 195 nt3.56□□□□□ -1.84
VPS13Q07878 ERP2YAL007C 648 nt3.56□□□□□ -1.84
VPS13Q07878 SAS10YDL153C 1833 nt3.56□□□□□ -1.84
VPS13Q07878 UBX5YDR330W 1503 nt3.56□□□□□ -1.84
VPS13Q07878 HOM2YDR158W 1098 nt3.55□□□□□ -1.84
VPS13Q07878 TPA1YER049W 1935 nt3.55□□□□□ -1.84
VPS13Q07878 MAK16YAL025C 921 nt3.55□□□□□ -1.84
VPS13Q07878 NOP7YGR103W 1818 nt3.55□□□□□ -1.84
VPS13Q07878 ALR2YFL050C 2577 nt3.55□□□□□ -1.84
VPS13Q07878 UBP13YBL067C 2244 nt3.55□□□□□ -1.84
VPS13Q07878 SHO1YER118C 1104 nt3.55□□□□□ -1.84
VPS13Q07878 AIM25YJR100C 984 nt3.55□□□□□ -1.84
VPS13Q07878 ARR1YPR199C 885 nt3.55□□□□□ -1.84
VPS13Q07878 CRZ1YNL027W 2037 nt3.55□□□□□ -1.84
VPS13Q07878 YDR222WYDR222W 1248 nt3.54□□□□□ -1.84
VPS13Q07878 IME4YGL192W 1803 nt3.54□□□□□ -1.84
VPS13Q07878 DRS1YLL008W 2259 nt3.54□□□□□ -1.84
VPS13Q07878 BCH1YMR237W 2175 nt3.53□□□□□ -1.84
VPS13Q07878 RSE1YML049C 4086 nt3.53□□□□□ -1.84
VPS13Q07878 RUF5-1RUF5-1 710 nt3.53□□□□□ -1.84
VPS13Q07878 RPL23AYBL087C 414 nt3.53□□□□□ -1.84
VPS13Q07878 RUF5-2RUF5-2 710 nt3.53□□□□□ -1.84
VPS13Q07878 COA2YPL189C-A 207 nt3.53□□□□□ -1.84
VPS13Q07878 MED4YOR174W 855 nt3.53□□□□□ -1.84
VPS13Q07878 ACE2YLR131C 2313 nt3.53□□□□□ -1.84
VPS13Q07878 ALA1YOR335C 2877 nt3.52□□□□□ -1.85
VPS13Q07878 TUM1YOR251C 915 nt3.52□□□□□ -1.85
VPS13Q07878 GFA1YKL104C 2154 nt3.52□□□□□ -1.85
VPS13Q07878 RMR1YGL250W 726 nt3.52□□□□□ -1.85
VPS13Q07878 YHR069C-AYHR069C-A 363 nt3.52□□□□□ -1.85
VPS13Q07878 BUB3YOR026W 1026 nt3.52□□□□□ -1.85
VPS13Q07878 GYP6YJL044C 1377 nt3.51□□□□□ -1.85
VPS13Q07878 ERJ5YFR041C 888 nt3.51□□□□□ -1.85
VPS13Q07878 SPO16YHR153C 597 nt3.51□□□□□ -1.85
VPS13Q07878 VMA1YDL185W 3216 nt3.51□□□□□ -1.85
VPS13Q07878 FMP25YLR077W 1752 nt3.51□□□□□ -1.85
VPS13Q07878 RAX2YLR084C 3663 nt3.51□□□□□ -1.85
VPS13Q07878 RPB3YIL021W 957 nt3.5□□□□□ -1.85
VPS13Q07878 AKR1YDR264C 2295 nt3.5□□□□□ -1.85
VPS13Q07878 DER1YBR201W 636 nt3.5□□□□□ -1.85
VPS13Q07878 APE1YKL103C 1545 nt3.5□□□□□ -1.85
VPS13Q07878 SIT1YEL065W 1887 nt3.5□□□□□ -1.85
VPS13Q07878 YDR537CYDR537C 606 nt3.5□□□□□ -1.85
VPS13Q07878 DOG1YHR044C 741 nt3.5□□□□□ -1.85
VPS13Q07878 EGT2YNL327W 3126 nt3.49□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 16.2 ms