Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.82■□□□□ 0.76
CLRN1P58418 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.82■□□□□ 0.76
CLRN1P58418 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.82■□□□□ 0.76
CLRN1P58418 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CLRN1P58418 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLRN1P58418 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CLRN1P58418 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLRN1P58418 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.81■□□□□ 0.76
CLRN1P58418 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CLRN1P58418 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLRN1P58418 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLRN1P58418 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLRN1P58418 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLRN1P58418 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLRN1P58418 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLRN1P58418 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.81■□□□□ 0.76
CLRN1P58418 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLRN1P58418 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLRN1P58418 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLRN1P58418 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLRN1P58418 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLRN1P58418 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CLRN1P58418 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.8■□□□□ 0.76
CLRN1P58418 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLRN1P58418 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CLRN1P58418 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.8■□□□□ 0.76
CLRN1P58418 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLRN1P58418 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.8■□□□□ 0.76
CLRN1P58418 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.8■□□□□ 0.76
CLRN1P58418 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLRN1P58418 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLRN1P58418 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLRN1P58418 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLRN1P58418 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
CLRN1P58418 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CLRN1P58418 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLRN1P58418 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLRN1P58418 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.79■□□□□ 0.76
CLRN1P58418 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLRN1P58418 AL356740.2-201ENST00000601559 647 ntBASIC19.79■□□□□ 0.76
CLRN1P58418 AL117332.1-201ENST00000622628 974 ntBASIC19.79■□□□□ 0.76
CLRN1P58418 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLRN1P58418 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.79■□□□□ 0.76
CLRN1P58418 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLRN1P58418 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CLRN1P58418 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLRN1P58418 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLRN1P58418 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLRN1P58418 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLRN1P58418 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLRN1P58418 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.78■□□□□ 0.76
CLRN1P58418 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLRN1P58418 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CLRN1P58418 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CLRN1P58418 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLRN1P58418 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CLRN1P58418 C17orf82-201ENST00000623772 1530 ntBASIC19.76■□□□□ 0.75
CLRN1P58418 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.76■□□□□ 0.75
CLRN1P58418 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.76■□□□□ 0.75
CLRN1P58418 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLRN1P58418 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.76■□□□□ 0.75
CLRN1P58418 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLRN1P58418 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.76■□□□□ 0.75
CLRN1P58418 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLRN1P58418 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLRN1P58418 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLRN1P58418 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLRN1P58418 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CLRN1P58418 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLRN1P58418 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLRN1P58418 C1orf229-201ENST00000623686 2258 ntBASIC19.76■□□□□ 0.75
CLRN1P58418 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.75■□□□□ 0.75
CLRN1P58418 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLRN1P58418 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLRN1P58418 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLRN1P58418 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLRN1P58418 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLRN1P58418 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLRN1P58418 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLRN1P58418 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CLRN1P58418 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.75■□□□□ 0.75
CLRN1P58418 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CLRN1P58418 DUX4L4-201ENST00000566884 1269 ntBASIC19.75■□□□□ 0.75
CLRN1P58418 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.75■□□□□ 0.75
CLRN1P58418 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLRN1P58418 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLRN1P58418 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLRN1P58418 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLRN1P58418 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.74■□□□□ 0.75
CLRN1P58418 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLRN1P58418 PKD1P6-201ENST00000343738 4769 ntBASIC19.74■□□□□ 0.75
CLRN1P58418 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLRN1P58418 AL356441.2-201ENST00000443009 864 ntBASIC19.74■□□□□ 0.75
CLRN1P58418 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLRN1P58418 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLRN1P58418 AC009086.3-201ENST00000623486 1008 ntBASIC19.74■□□□□ 0.75
CLRN1P58418 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.74■□□□□ 0.75
CLRN1P58418 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.74■□□□□ 0.75
CLRN1P58418 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLRN1P58418 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms