Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLCSP50747 AC007375.3-201ENST00000600936 2314 ntBASIC21.17■□□□□ 0.98
HLCSP50747 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLCSP50747 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HLCSP50747 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLCSP50747 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLCSP50747 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLCSP50747 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.16■□□□□ 0.98
HLCSP50747 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
HLCSP50747 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HLCSP50747 HLA-L-211ENST00000482052 1765 ntBASIC21.16■□□□□ 0.98
HLCSP50747 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLCSP50747 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLCSP50747 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.16■□□□□ 0.98
HLCSP50747 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
HLCSP50747 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HLCSP50747 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HLCSP50747 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLCSP50747 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.15■□□□□ 0.98
HLCSP50747 AL022069.1-201ENST00000568025 1636 ntBASIC21.15■□□□□ 0.98
HLCSP50747 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HLCSP50747 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLCSP50747 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLCSP50747 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HLCSP50747 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
HLCSP50747 AL512631.2-201ENST00000604634 923 ntBASIC21.15■□□□□ 0.98
HLCSP50747 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.15■□□□□ 0.98
HLCSP50747 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.15■□□□□ 0.98
HLCSP50747 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HLCSP50747 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HLCSP50747 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.14■□□□□ 0.98
HLCSP50747 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HLCSP50747 AC005703.6-201ENST00000623265 1329 ntBASIC21.14■□□□□ 0.97
HLCSP50747 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HLCSP50747 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.14■□□□□ 0.97
HLCSP50747 MIR4466-201ENST00000606121 54 ntBASIC21.14■□□□□ 0.97
HLCSP50747 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.14■□□□□ 0.97
HLCSP50747 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HLCSP50747 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.14■□□□□ 0.97
HLCSP50747 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HLCSP50747 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLCSP50747 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLCSP50747 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HLCSP50747 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLCSP50747 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLCSP50747 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HLCSP50747 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLCSP50747 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HLCSP50747 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLCSP50747 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLCSP50747 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
HLCSP50747 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HLCSP50747 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLCSP50747 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
HLCSP50747 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.12■□□□□ 0.97
HLCSP50747 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.12■□□□□ 0.97
HLCSP50747 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HLCSP50747 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HLCSP50747 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HLCSP50747 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.12■□□□□ 0.97
HLCSP50747 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.12■□□□□ 0.97
HLCSP50747 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HLCSP50747 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLCSP50747 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLCSP50747 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HLCSP50747 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLCSP50747 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
HLCSP50747 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLCSP50747 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLCSP50747 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
HLCSP50747 DUSP8P3-201ENST00000399571 1760 ntBASIC21.11■□□□□ 0.97
HLCSP50747 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.11■□□□□ 0.97
HLCSP50747 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.11■□□□□ 0.97
HLCSP50747 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HLCSP50747 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.11■□□□□ 0.97
HLCSP50747 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.11■□□□□ 0.97
HLCSP50747 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLCSP50747 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLCSP50747 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
HLCSP50747 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLCSP50747 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.11■□□□□ 0.97
HLCSP50747 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLCSP50747 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HLCSP50747 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLCSP50747 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLCSP50747 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HLCSP50747 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.1■□□□□ 0.97
HLCSP50747 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
HLCSP50747 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HLCSP50747 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLCSP50747 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLCSP50747 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLCSP50747 ANOS2P-203ENST00000472227 1816 ntBASIC21.09■□□□□ 0.97
HLCSP50747 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLCSP50747 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLCSP50747 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.09■□□□□ 0.97
HLCSP50747 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HLCSP50747 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLCSP50747 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLCSP50747 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms